SSRome Genomic Database

Archaea

Archaea Genic Region

Repeat Sequence Gene symbol or Locus tag Organism Name Acidiplasma aeolicum Caldivirga sp. Candidatus Acidianus Candidatus Halobonum Candidatus Methanomethylophilus Candidatus Methanoperedens Candidatus Micrarchaeota Candidatus Nitrosoarchaeum Haloferax prahovense Haloferax sulfurifontis Haloferax volcanii Halogeometricum borinquense Halogeometricum limi Halogeometricum pallidum Halogeometricum rufum Halogranum amylolyticum Halogranum gelatinilyticum Halogranum rubrum Halogranum salarium Halohasta litchfieldiae Halolamina pelagica Halolamina rubra Halolamina sp. Halomicrobium katesii Halomicrobium zhouii Haloparvum sedimenti Halopelagius inordinatus Halopelagius longus Halopenitus malekzadehii Halopenitus persicus Halopiger djelfimassiliensis Halopiger salifodinae Halopiger xanaduensis Haloplanus natans Haloplanus vescus Haloprofundus marisrubri Haloquadratum walsbyi Halorhabdus tiamatea Halorientalis persicus Halorientalis regularis Halorientalis sp. Halorubrum aethiopicum Halorubrum aidingense Halorubrum arcis Halorubrum californiensis Halorubrum chaoviator Halorubrum coriense Halorubrum distributum Halorubrum ezzemoulense Halorubrum halodurans Halorubrum halophilum Halorubrum hochstenium Halorubrum kocurii Halorubrum lacusprofundi Halorubrum lipolyticum Halorubrum litoreum Halorubrum persicum Halorubrum saccharovorum Halorubrum sodomense Halorubrum sp. Halorubrum tebenquichense Halorubrum terrestre Halorubrum trapanicum Halorubrum tropicale Halorubrum vacuolatum Halosimplex carlsbadense Halostagnicola kamekurae Halostagnicola larsenii Halostagnicola sp. Haloterrigena daqingensis Haloterrigena hispanica Haloterrigena jeotgali Haloterrigena limicola Haloterrigena mahii Haloterrigena saccharevitans Haloterrigena salina Haloterrigena thermotolerans Haloterrigena turkmenica Halovenus aranensis Halovivax asiaticus Metallosphaera yellowstonensis Methanobacterium arcticum Methanobacterium bryantii Methanobacterium congolense Methanobacterium formicicum Methanobacterium sp. Methanobacterium veterum Methanobrevibacter arboriphilus Methanobrevibacter boviskoreani Methanobrevibacter curvatus Methanobrevibacter cuticularis Methanobrevibacter filiformis Methanobrevibacter gottschalkii Methanobrevibacter olleyae Methanobrevibacter oralis Methanobrevibacter smithii Methanobrevibacter sp. Methanobrevibacter wolinii Methanocaldococcus fervens Methanocaldococcus sp. Methanocaldococcus villosus Methanococcoides methylutens Methanococcoides vulcani Methanocorpusculum bavaricum Methanocorpusculum parvum Methanoculleus chikugoensis Methanoculleus horonobensis Methanoculleus sediminis Methanoculleus sp. Methanoculleus thermophilus Methanogenium cariaci Methanohalobium evestigatum Methanohalophilus euhalobius Methanohalophilus halophilus Methanohalophilus portucalensis Methanolacinia paynteri Methanolobus profundi Methanolobus psychrotolerans Methanolobus vulcani Methanomassiliicoccus luminyensis Methanomethylovorans hollandica Methanonatronarchaeum thermophilum Methanosaeta harundinacea Methanosarcina flavescens Methanosarcina mazei Repeat Type Mono Di Tri Tetra Penta Hexa Compound

Archaea Non-Genic Region

Primer Id Repeat Sequence Organism Name Acidiplasma aeolicum Caldivirga sp. Candidatus Acidianus Candidatus Halobonum Candidatus Methanomethylophilus Candidatus Methanoperedens Candidatus Micrarchaeota Candidatus Nitrosoarchaeum Haloferax prahovense Haloferax sulfurifontis Haloferax volcanii Halogeometricum borinquense Halogeometricum limi Halogeometricum pallidum Halogeometricum rufum Halogranum amylolyticum Halogranum gelatinilyticum Halogranum rubrum Halogranum salarium Halohasta litchfieldiae Halolamina pelagica Halolamina rubra Halolamina sp. Halomicrobium katesii Halomicrobium zhouii Haloparvum sedimenti Halopelagius inordinatus Halopelagius longus Halopenitus malekzadehii Halopenitus persicus Halopiger djelfimassiliensis Halopiger salifodinae Halopiger xanaduensis Haloplanus natans Haloplanus vescus Haloprofundus marisrubri Haloquadratum walsbyi Halorhabdus tiamatea Halorientalis persicus Halorientalis regularis Halorientalis sp. Halorubrum aethiopicum Halorubrum aidingense Halorubrum arcis Halorubrum californiensis Halorubrum chaoviator Halorubrum coriense Halorubrum distributum Halorubrum ezzemoulense Halorubrum halodurans Halorubrum halophilum Halorubrum hochstenium Halorubrum kocurii Halorubrum lacusprofundi Halorubrum lipolyticum Halorubrum litoreum Halorubrum persicum Halorubrum saccharovorum Halorubrum sodomense Halorubrum sp. Halorubrum tebenquichense Halorubrum terrestre Halorubrum trapanicum Halorubrum tropicale Halorubrum vacuolatum Halosimplex carlsbadense Halostagnicola kamekurae Halostagnicola larsenii Halostagnicola sp. Haloterrigena daqingensis Haloterrigena hispanica Haloterrigena jeotgali Haloterrigena limicola Haloterrigena mahii Haloterrigena saccharevitans Haloterrigena salina Haloterrigena thermotolerans Haloterrigena turkmenica Halovenus aranensis Halovivax asiaticus Metallosphaera yellowstonensis Methanobacterium arcticum Methanobacterium bryantii Methanobacterium congolense Methanobacterium formicicum Methanobacterium sp. Methanobacterium veterum Methanobrevibacter arboriphilus Methanobrevibacter boviskoreani Methanobrevibacter curvatus Methanobrevibacter cuticularis Methanobrevibacter filiformis Methanobrevibacter gottschalkii Methanobrevibacter olleyae Methanobrevibacter oralis Methanobrevibacter smithii Methanobrevibacter sp. Methanobrevibacter wolinii Methanocaldococcus fervens Methanocaldococcus sp. Methanocaldococcus villosus Methanococcoides methylutens Methanococcoides vulcani Methanocorpusculum bavaricum Methanocorpusculum parvum Methanoculleus chikugoensis Methanoculleus horonobensis Methanoculleus sediminis Methanoculleus sp. Methanoculleus thermophilus Methanogenium cariaci Methanohalobium evestigatum Methanohalophilus euhalobius Methanohalophilus halophilus Methanohalophilus portucalensis Methanolacinia paynteri Methanolobus profundi Methanolobus psychrotolerans Methanolobus vulcani Methanomassiliicoccus luminyensis Methanomethylovorans hollandica Methanonatronarchaeum thermophilum Methanosaeta harundinacea Methanosarcina flavescens Methanosarcina mazei Repeat Type Mono Di Tri Tetra Penta Hexa Compound

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