SSRome Genomic Database

Bacteria

Bacteria Genic Region

Repeat Sequence Gene symbol or Locus tag Organism Name Acidaminococcus timonensis Acidibacillus ferrooxidans Acidiferrobacter thiooxydans Acidihalobacter ferrooxidans Acidihalobacter prosperus Acidimicrobium ferrooxidans Acidiphilium angustum Acidiphilium cryptum Acidiphilium multivorum Acidipropionibacterium acidipropionici Acidipropionibacterium jensenii Acidipropionibacterium thoenii Acidisphaera rubrifaciens Acidithiobacillus albertensis Acidithiobacillus caldus Acidithiobacillus ferrivorans Acidithiobacillus ferrooxidans Acidithiobacillus thiooxidans Acidithrix ferrooxidans Acidobacteria bacterium Acidobacteriaceae bacterium Acidobacterium ailaaui Acidobacterium capsulatum Acidocella aminolytica Acidocella facilis Acidomonas methanolica Acidothermus cellulolyticus Acidovorax avenae Acidovorax caeni Acidovorax cattleyae Acidovorax citrulli Acidovorax delafieldii Acidovorax ebreus Acidovorax kalamii Acidovorax konjaci Acidovorax oryzae Acidovorax radicis Acidovorax soli Allobaculum stercoricanis Allochromatium vinosum Allochromatium warmingii Allofrancisella guangzhouensis Allofustis seminis Alloiococcus otitis Allokutzneria albata Allonocardiopsis opalescens Alloprevotella rava Alloprevotella tannerae Allosalinactinospora lopnorensis Alloscardovia criceti Alloscardovia macacae Alloscardovia omnicolens Altererythrobacter atlanticus Altererythrobacter dongtanensis Altererythrobacter epoxidivorans Altererythrobacter ishigakiensis Altererythrobacter mangrovi Altererythrobacter marensis Altererythrobacter namhicola Altererythrobacter troitsensis Alteribacillus bidgolensis Alteribacillus iranensis Alteribacillus persepolensis Alteromonadaceae bacterium Alteromonadales bacterium Alteromonas abrolhosensis Alteromonas addita Alteromonas australica Alteromonas confluentis Alteromonas gracilis Alteromonas lipolytica Alteromonas macleodii Alteromonas marina Alteromonas mediterranea Alteromonas naphthalenivorans Alteromonas pelagimontana Alteromonas stellipolaris Altibacter lentus Alysiella crassa Amantichitinum ursilacus Aminiphilus circumscriptus Aminobacter aminovorans Aminobacterium colombiense Aminobacterium mobile Aminomonas paucivorans Ammonifex degensii Amorphus coralli Amphibacillus jilinensis Amphibacillus marinus Amphibacillus sediminis Amphibacillus xylanus Amphritea atlantica Amphritea japonica Amycolatopsis alba Amycolatopsis australiensis Amycolatopsis azurea Amycolatopsis balhimycina Amycolatopsis benzoatilytica Amycolatopsis coloradensis Amycolatopsis decaplanina Amycolatopsis halophila Amycolatopsis japonica Amycolatopsis jejuensis Amycolatopsis kentuckyensis Amycolatopsis keratiniphila Amycolatopsis lexingtonensis Amycolatopsis lurida Amycolatopsis marina Amycolatopsis mediterranei Amycolatopsis methanolica Amycolatopsis nigrescens Amycolatopsis niigatensis Amycolatopsis orientalis Amycolatopsis pretoriensis Amycolatopsis regifaucium Amycolatopsis rifamycinica Amycolatopsis rubida Amycolatopsis saalfeldensis Amycolatopsis sacchari Amycolatopsis sp. Amycolatopsis sulphurea Amycolatopsis taiwanensis Amycolatopsis thailandensis Amycolatopsis thermoflava Amycolatopsis tolypomycina Amycolatopsis vancoresmycina Amycolatopsis xylanica Amylibacter cionae Anabaena cylindrica Anabaenopsis circularis Anaeroarcus burkinensis Anaerobacillus alkalidiazotrophicus Anaerobacillus alkalilacustris Anaerobacillus arseniciselenatis Anaerobacillus isosaccharinicus Anaerobacillus macyae Anaerobiospirillum succiniciproducens Anaerobium acetethylicum Anaerobranca gottschalkii Anaerococcus hydrogenalis Anaerococcus lactolyticus Anaerococcus obesiensis Anaerococcus octavius Anaerococcus pacaensis Anaerococcus prevotii Anaerococcus provencensis Anaerococcus rubeinfantis Anaerococcus senegalensis Anaerococcus tetradius Anaerococcus vaginalis Anaerocolumna aminovalerica Anaerofustis stercorihominis Anaeroglobus geminatus Anaerolineaceae bacterium Anaerolinea thermolimosa Anaerolinea thermophila Anaeromassilibacillus senegalensis Anaeromicrobium sediminis Anaeromusa acidaminophila Anaeromyxobacter dehalogenans Anaerophaga thermohalophila Anaerosalibacter massiliensis Anaerosporomusa subterranea Anaerostipes caccae Anaerostipes hadrus Anaerotignum lactatifermentans Anaerotignum neopropionicum Anaerotruncus colihominis Anaerotruncus rubiinfantis Anaerovibrio lipolyticus Anaerovorax odorimutans Anaplasma centrale Anaplasma marginale Anaplasma ovis Anaplasma phagocytophilum Ancylobacter rudongensis Anditalea andensis Andreesenia angusta Andreprevotia chitinilytica Aneurinibacillus aneurinilyticus Aneurinibacillus migulanus Aneurinibacillus soli Aneurinibacillus terranovensis Aneurinibacillus thermoaerophilus Aneurinibacillus tyrosinisolvens Angelakisella massiliensis Anoxybacillus amylolyticus Anoxybacillus ayderensis Anoxybacillus flavithermus Anoxybacillus geothermalis Anoxybacillus gonensis Anoxybacillus kamchatkensis Anoxybacillus mongoliensis Anoxybacillus pushchinoensis Anoxybacillus suryakundensis Anoxybacillus tepidamans Anoxybacillus thermarum Antarctobacter heliothermus Antricoccus suffuscus Aphanizomenon flos-aquae Aphanothece hegewaldii Apibacter adventoris Apibacter mensalis Aquabacterium parvum Aquamicrobium aerolatum Aquamicrobium defluvii Aquaspirillum serpens Aquidulcibacter paucihalophilus Aquifex aeolicus Aquimarina agarilytica Aquimarina agarivorans Aquimarina aggregata Aquimarina amphilecti Aquimarina atlantica Aquimarina latercula Aquimarina longa Aquimarina macrocephali Aquimarina megaterium Aquimarina muelleri Aquimarina pacifica Aquimonas voraii Aquincola tertiaricarbonis Aquisalimonas asiatica Aquitalea magnusonii Aquitalea pelogenes Arachidicoccus rhizosphaerae Arcanobacterium haemolyticum Arcanobacterium phocae Arcanobacterium urinimassiliense Archangium gephyra Archangium violaceum Arcobacter anaerophilus Arcobacter butzleri Arcobacter canalis Arcobacter cibarius Arcobacter cryaerophilus Arcobacter faecis Arcobacter haliotis Arcobacter halophilus Arcobacter lanthieri Arcobacter lekithochrous Arcobacter marinus Arcobacter molluscorum Arcobacter nitrofigilis Arcobacter porcinus Arcobacter skirrowii Arcobacter thereius Arcticibacter eurypsychrophilus Arcticibacter pallidicorallinus Arcticibacter svalbardensis Ardenticatena maritima Arenibacter algicola Arenibacter catalasegens Arenibacter certesii Arenibacter hampyeongensis Arenibacter latericius Arenimonas composti Arenimonas donghaensis Arenimonas malthae Arenimonas metalli Arenimonas oryziterrae Arenitalea lutea Arhodomonas aquaeolei Armatimonadetes bacterium Arsenicibacter rosenii Arsenicicoccus bolidensis Arsenophonus endosymbiont Arsenophonus nasoniae Arsukibacterium ikkense Arthrobacter agilis Arthrobacter alpinus Arthrobacter castelli Arthrobacter crystallopoietes Arthrobacter cupressi Arthrobacter enclensis Arthrobacter globiformis Arthrobacter koreensis Arthrobacter luteolus Arthrobacter nitrophenolicus Arthrobacter pityocampae Arthrobacter ruber Arthrobacter subterraneus Arthrobacter woluwensis Arthrospira maxima Arthrospira platensis Asaia astilbis Asaia bogorensis Asaia platycodi Asaia prunellae Asanoa ishikariensis Aster yellows Asticcacaulis benevestitus Asticcacaulis biprosthecum Asticcacaulis excentricus Asticcacaulis taihuensis Atlantibacter hermannii Atopobacter phocae Atopobium deltae Atopobium fossor Atopobium minutum Atopobium parvulum Atopobium rimae Atopobium vaginae Atopococcus tabaci Atribacteria bacterium Aulosira laxa Aurantimicrobium minutum Aurantimonadaceae bacterium Aurantimonas coralicida Aurantimonas manganoxydans Auraticoccus monumenti Aureicoccus marinus Aureimonas altamirensis Aureimonas frigidaquae Aureimonas jatrophae Aureimonas phyllosphaerae Aureimonas ureilytica Aureitalea marina Auricoccus indicus Austwickia chelonae Avibacterium endocarditidis Avibacterium gallinarum Avibacterium paragallinarum Azoarcus aromaticum Azoarcus olearius Azoarcus toluclasticus Azohydromonas australica Azohydromonas lata Azonexus hydrophilus Azorhizobium caulinodans Azorhizobium doebereinerae Azospirillum brasilense Azospirillum halopraeferens Azospirillum humicireducens Azospirillum lipoferum Azospirillum thiophilum Azotobacter beijerinckii Azotobacter chroococcum Azotobacter vinelandii Azovibrio restrictus Bacillaceae bacterium Bacilli bacterium Bacillus abyssalis Bacillus acidiceler Bacillus acidicola Bacillus acidiproducens Bacillus aerophilus Bacillus aidingensis Bacillus akibai Bacillus alcalophilus Bacillus alkalinitrilicus Bacillus alkalitelluris Bacillus altitudinis Bacillus alveayuensis Bacillus amyloliquefaciens Bacillus andreraoultii Bacillus anthracis Bacillus aquimaris Bacillus aryabhattai Bacillus atrophaeus Bacillus aurantiacus Bacillus australimaris Bacillus azotoformans Bacillus badius Bacillus bataviensis Bacillus beveridgei Bacillus bingmayongensis Bacillus bogoriensis Bacillus bombysepticus Bacillus boroniphilus Bacillus butanolivorans Bacillus camelliae Bacillus campisalis Bacillus canaveralius Bacillus caseinilyticus Bacillus cecembensis Bacillus cellulasensis Bacillus cellulosilyticus Bacillus cereus Dechlorosoma suillum Repeat Type Mono Di Tri Tetra Penta Hexa Compound

Bacteria Non-Genic Region

Primer Id Repeat Sequence Organism Name Acidaminococcus timonensis Acidibacillus ferrooxidans Acidiferrobacter thiooxydans Acidihalobacter ferrooxidans Acidihalobacter prosperus Acidimicrobium ferrooxidans Acidiphilium angustum Acidiphilium cryptum Acidiphilium multivorum Acidipropionibacterium acidipropionici Acidipropionibacterium jensenii Acidipropionibacterium thoenii Acidisphaera rubrifaciens Acidithiobacillus albertensis Acidithiobacillus caldus Acidithiobacillus ferrivorans Acidithiobacillus ferrooxidans Acidithiobacillus thiooxidans Acidithrix ferrooxidans Acidobacteria bacterium Acidobacteriaceae bacterium Acidobacterium ailaaui Acidobacterium capsulatum Acidocella aminolytica Acidocella facilis Acidomonas methanolica Acidothermus cellulolyticus Acidovorax avenae Acidovorax caeni Acidovorax cattleyae Acidovorax citrulli Acidovorax delafieldii Acidovorax ebreus Acidovorax kalamii Acidovorax konjaci Acidovorax oryzae Acidovorax radicis Acidovorax soli Allobaculum stercoricanis Allochromatium vinosum Allochromatium warmingii Allofrancisella guangzhouensis Allofustis seminis Alloiococcus otitis Allokutzneria albata Allonocardiopsis opalescens Alloprevotella rava Alloprevotella tannerae Allosalinactinospora lopnorensis Alloscardovia criceti Alloscardovia macacae Alloscardovia omnicolens Altererythrobacter atlanticus Altererythrobacter dongtanensis Altererythrobacter epoxidivorans Altererythrobacter ishigakiensis Altererythrobacter mangrovi Altererythrobacter marensis Altererythrobacter namhicola Altererythrobacter troitsensis Alteribacillus bidgolensis Alteribacillus iranensis Alteribacillus persepolensis Alteromonadaceae bacterium Alteromonadales bacterium Alteromonas abrolhosensis Alteromonas addita Alteromonas australica Alteromonas confluentis Alteromonas gracilis Alteromonas lipolytica Alteromonas macleodii Alteromonas marina Alteromonas mediterranea Alteromonas naphthalenivorans Alteromonas pelagimontana Alteromonas stellipolaris Altibacter lentus Alysiella crassa Amantichitinum ursilacus Aminiphilus circumscriptus Aminobacter aminovorans Aminobacterium colombiense Aminobacterium mobile Aminomonas paucivorans Ammonifex degensii Amorphus coralli Amphibacillus jilinensis Amphibacillus marinus Amphibacillus sediminis Amphibacillus xylanus Amphritea atlantica Amphritea japonica Amycolatopsis alba Amycolatopsis australiensis Amycolatopsis azurea Amycolatopsis balhimycina Amycolatopsis benzoatilytica Amycolatopsis coloradensis Amycolatopsis decaplanina Amycolatopsis halophila Amycolatopsis japonica Amycolatopsis jejuensis Amycolatopsis kentuckyensis Amycolatopsis keratiniphila Amycolatopsis lexingtonensis Amycolatopsis lurida Amycolatopsis marina Amycolatopsis mediterranei Amycolatopsis methanolica Amycolatopsis nigrescens Amycolatopsis niigatensis Amycolatopsis orientalis Amycolatopsis pretoriensis Amycolatopsis regifaucium Amycolatopsis rifamycinica Amycolatopsis rubida Amycolatopsis saalfeldensis Amycolatopsis sacchari Amycolatopsis sp. Amycolatopsis sulphurea Amycolatopsis taiwanensis Amycolatopsis thailandensis Amycolatopsis thermoflava Amycolatopsis tolypomycina Amycolatopsis vancoresmycina Amycolatopsis xylanica Amylibacter cionae Anabaena cylindrica Anabaenopsis circularis Anaeroarcus burkinensis Anaerobacillus alkalidiazotrophicus Anaerobacillus alkalilacustris Anaerobacillus arseniciselenatis Anaerobacillus isosaccharinicus Anaerobacillus macyae Anaerobiospirillum succiniciproducens Anaerobium acetethylicum Anaerobranca gottschalkii Anaerococcus hydrogenalis Anaerococcus lactolyticus Anaerococcus obesiensis Anaerococcus octavius Anaerococcus pacaensis Anaerococcus prevotii Anaerococcus provencensis Anaerococcus rubeinfantis Anaerococcus senegalensis Anaerococcus tetradius Anaerococcus vaginalis Anaerocolumna aminovalerica Anaerofustis stercorihominis Anaeroglobus geminatus Anaerolineaceae bacterium Anaerolinea thermolimosa Anaerolinea thermophila Anaeromassilibacillus senegalensis Anaeromicrobium sediminis Anaeromusa acidaminophila Anaeromyxobacter dehalogenans Anaerophaga thermohalophila Anaerosalibacter massiliensis Anaerosporomusa subterranea Anaerostipes caccae Anaerostipes hadrus Anaerotignum lactatifermentans Anaerotignum neopropionicum Anaerotruncus colihominis Anaerotruncus rubiinfantis Anaerovibrio lipolyticus Anaerovorax odorimutans Anaplasma centrale Anaplasma marginale Anaplasma ovis Anaplasma phagocytophilum Ancylobacter rudongensis Anditalea andensis Andreesenia angusta Andreprevotia chitinilytica Aneurinibacillus aneurinilyticus Aneurinibacillus migulanus Aneurinibacillus soli Aneurinibacillus terranovensis Aneurinibacillus thermoaerophilus Aneurinibacillus tyrosinisolvens Angelakisella massiliensis Anoxybacillus amylolyticus Anoxybacillus ayderensis Anoxybacillus flavithermus Anoxybacillus geothermalis Anoxybacillus gonensis Anoxybacillus kamchatkensis Anoxybacillus mongoliensis Anoxybacillus pushchinoensis Anoxybacillus suryakundensis Anoxybacillus tepidamans Anoxybacillus thermarum Antarctobacter heliothermus Antricoccus suffuscus Aphanizomenon flos-aquae Aphanothece hegewaldii Apibacter adventoris Apibacter mensalis Aquabacterium parvum Aquamicrobium aerolatum Aquamicrobium defluvii Aquaspirillum serpens Aquidulcibacter paucihalophilus Aquifex aeolicus Aquimarina agarilytica Aquimarina agarivorans Aquimarina aggregata Aquimarina amphilecti Aquimarina atlantica Aquimarina latercula Aquimarina longa Aquimarina macrocephali Aquimarina megaterium Aquimarina muelleri Aquimarina pacifica Aquimonas voraii Aquincola tertiaricarbonis Aquisalimonas asiatica Aquitalea magnusonii Aquitalea pelogenes Arachidicoccus rhizosphaerae Arcanobacterium haemolyticum Arcanobacterium phocae Arcanobacterium urinimassiliense Archangium gephyra Archangium violaceum Arcobacter anaerophilus Arcobacter butzleri Arcobacter canalis Arcobacter cibarius Arcobacter cryaerophilus Arcobacter faecis Arcobacter haliotis Arcobacter halophilus Arcobacter lanthieri Arcobacter lekithochrous Arcobacter marinus Arcobacter molluscorum Arcobacter nitrofigilis Arcobacter porcinus Arcobacter skirrowii Arcobacter thereius Arcticibacter eurypsychrophilus Arcticibacter pallidicorallinus Arcticibacter svalbardensis Ardenticatena maritima Arenibacter algicola Arenibacter catalasegens Arenibacter certesii Arenibacter hampyeongensis Arenibacter latericius Arenimonas composti Arenimonas donghaensis Arenimonas malthae Arenimonas metalli Arenimonas oryziterrae Arenitalea lutea Arhodomonas aquaeolei Armatimonadetes bacterium Arsenicibacter rosenii Arsenicicoccus bolidensis Arsenophonus endosymbiont Arsenophonus nasoniae Arsukibacterium ikkense Arthrobacter agilis Arthrobacter alpinus Arthrobacter castelli Arthrobacter crystallopoietes Arthrobacter cupressi Arthrobacter enclensis Arthrobacter globiformis Arthrobacter koreensis Arthrobacter luteolus Arthrobacter nitrophenolicus Arthrobacter pityocampae Arthrobacter ruber Arthrobacter subterraneus Arthrobacter woluwensis Arthrospira maxima Arthrospira platensis Asaia astilbis Asaia bogorensis Asaia platycodi Asaia prunellae Asanoa ishikariensis Aster yellows Asticcacaulis benevestitus Asticcacaulis biprosthecum Asticcacaulis excentricus Asticcacaulis taihuensis Atlantibacter hermannii Atopobacter phocae Atopobium deltae Atopobium fossor Atopobium minutum Atopobium parvulum Atopobium rimae Atopobium vaginae Atopococcus tabaci Atribacteria bacterium Aulosira laxa Aurantimicrobium minutum Aurantimonadaceae bacterium Aurantimonas coralicida Aurantimonas manganoxydans Auraticoccus monumenti Aureicoccus marinus Aureimonas altamirensis Aureimonas frigidaquae Aureimonas jatrophae Aureimonas phyllosphaerae Aureimonas ureilytica Aureitalea marina Auricoccus indicus Austwickia chelonae Avibacterium endocarditidis Avibacterium gallinarum Avibacterium paragallinarum Azoarcus aromaticum Azoarcus olearius Azoarcus toluclasticus Azohydromonas australica Azohydromonas lata Azonexus hydrophilus Azorhizobium caulinodans Azorhizobium doebereinerae Azospirillum brasilense Azospirillum halopraeferens Azospirillum humicireducens Azospirillum lipoferum Azospirillum thiophilum Azotobacter beijerinckii Azotobacter chroococcum Azotobacter vinelandii Azovibrio restrictus Bacillaceae bacterium Bacilli bacterium Bacillus abyssalis Bacillus acidiceler Bacillus acidicola Bacillus acidiproducens Bacillus aerophilus Bacillus aidingensis Bacillus akibai Bacillus alcalophilus Bacillus alkalinitrilicus Bacillus alkalitelluris Bacillus altitudinis Bacillus alveayuensis Bacillus amyloliquefaciens Bacillus andreraoultii Bacillus anthracis Bacillus aquimaris Bacillus aryabhattai Bacillus atrophaeus Bacillus aurantiacus Bacillus australimaris Bacillus azotoformans Bacillus badius Bacillus bataviensis Bacillus beveridgei Bacillus bingmayongensis Bacillus bogoriensis Bacillus bombysepticus Bacillus boroniphilus Bacillus butanolivorans Bacillus camelliae Bacillus campisalis Bacillus canaveralius Bacillus caseinilyticus Bacillus cecembensis Bacillus cellulasensis Bacillus cellulosilyticus Bacillus cereus Dechlorosoma suillum Repeat Type Mono Di Tri Tetra Penta Hexa Compound

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