SSRome Genomic Database

Fungi

Fungi Genic Region

Repeat Sequence Gene symbol or Locus tag Organism Name Ajellomyces dermatitidis Amorphotheca resinae Anthracocystis flocculosa Arthrobotrys oligospora Arthroderma otae Ascoidea rubescens Aspergillus aculeatus Aspergillus bombycis Aspergillus campestris Aspergillus candidus Aspergillus clavatus Aspergillus fischeri Aspergillus flavus Aspergillus fumigatus Aspergillus glaucus Aspergillus nidulans Aspergillus niger Aspergillus nomius Aspergillus novofumigatus Aspergillus oryzae Aspergillus steynii Aspergillus terreus Aureobasidium namibiae Aureobasidium subglaciale Babjeviella inositovora Batrachochytrium dendrobatidis Baudoinia panamericana Beauveria bassiana Bipolaris maydis Bipolaris oryzae Bipolaris sorokiniana Bipolaris victoriae Bipolaris zeicola Botrytis cinerea Candida albicans Candida dubliniensis Candida orthopsilosis Candida tanzawaensis Candida tropicalis Capronia coronata Capronia epimyces Cercospora beticola Chaetomium globosum Chaetomium thermophilum Cladophialophora carrionii Cladophialophora immunda Cladophialophora psammophila Cladophialophora yegresii Clavispora lusitaniae Coccidioides immitis Coccidioides posadasii Colletotrichum graminicola Colletotrichum higginsianum Colletotrichum orchidophilum Coniophora puteana Coniosporium apollinis Coprinopsis cinerea Cordyceps fumosorosea Cordyceps militaris Cryptococcus amylolentus Cryptococcus gattii Cryptococcus neoformans Cutaneotrichosporon oleaginosus Cyberlindnera jadinii Cyphellophora europaea Debaryomyces fabryi Debaryomyces hansenii Dichomitus squalens Diplodia corticola Encephalitozoon cuniculi Encephalitozoon hellem Encephalitozoon intestinalis Encephalitozoon romaleae Endocarpon pusillum Eremothecium cymbalariae Eremothecium gossypii Eremothecium sinecaudum Exophiala aquamarina Exophiala dermatitidis Exophiala mesophila Exophiala oligosperma Exophiala spinifera Exophiala xenobiotica Fibroporia radiculosa Fomitiporia mediterranea Fonsecaea erecta Fonsecaea monophora Fonsecaea multimorphosa Fonsecaea nubica Fonsecaea pedrosoi Fusarium fujikuroi Fusarium graminearum Fusarium oxysporum Fusarium pseudograminearum Fusarium verticillioides Gaeumannomyces tritici Glarea lozoyensis Gloeophyllum trabeum Grosmannia clavigera Heterobasidion irregulare Histoplasma capsulatum Hyphopichia burtonii Kalmanozyma brasiliensis Kazachstania africana Kazachstania naganishii Kluyveromyces lactis Kluyveromyces marxianus Kockovaella imperatae Komagataella phaffii Kuraishia capsulata Kwoniella bestiolae Kwoniella dejecticola Kwoniella mangroviensis Kwoniella pini Laccaria bicolor Lachancea lanzarotensis Lachancea thermotolerans Leptosphaeria maculans Lobosporangium transversale Magnaporthe oryzae Malassezia globosa Malassezia pachydermatis Malassezia sympodialis Marssonina brunnea Melampsora larici-populina Meliniomyces bicolor Metarhizium acridum Metarhizium brunneum Metarhizium robertsii Metschnikowia bicuspidata Meyerozyma guilliermondii Mitosporidium daphniae Mixia osmundae Moesziomyces antarcticus Nannizzia gypsea Naumovozyma castellii Naumovozyma dairenensis Nematocida parisii Neurospora crassa Neurospora tetrasperma Nosema ceranae Ogataea parapolymorpha Ogataea polymorpha Ordospora colligata Paracoccidioides brasiliensis Paracoccidioides lutzii Paraphaeosphaeria sporulosa Parastagonospora nodorum Penicilliopsis zonata Penicillium arizonense Penicillium chrysogenum Penicillium digitatum Penicillium expansum Penicillium marneffei Pestalotiopsis fici Phaeoacremonium minimum Phanerochaete carnosa Phialocephala scopiformis Phialophora attae Phycomyces blakesleeanus Pichia kudriavzevii Pichia membranifaciens Pneumocystis carinii Pneumocystis jirovecii Pneumocystis murina Pochonia chlamydosporia Podospora anserina Postia placenta Pseudocercospora fijiensis Pseudogymnoascus destructans Pseudogymnoascus verrucosus Pseudozyma hubeiensis Puccinia graminis Punctularia strigosozonata Purpureocillium lilacinum Pyrenophora tritici-repentis Ramularia collo-cygni Rasamsonia emersonii Rhinocladiella mackenziei Rhizopus microsporus Rhodotorula graminis Rhodotorula toruloides Saccharomyces cerevisiae Saccharomyces eubayanus Saitoella complicata Scedosporium apiospermum Scheffersomyces stipitis Schizophyllum commune Schizosaccharomyces cryophilus Schizosaccharomyces japonicus Schizosaccharomyces octosporus Schizosaccharomyces pombe Sclerotinia sclerotiorum Serpula lacrymans Setosphaeria turcica sorbophila strain Sordaria macrospora Spathaspora passalidarum Sphaerulina musiva Spizellomyces punctatus Sporothrix schenckii Stereum hirsutum Sugiyamaella lignohabitans Talaromyces atroroseus Talaromyces stipitatus Tetrapisispora blattae Tetrapisispora phaffii Thermothelomyces thermophila Thielavia terrestris Tilletiaria anomala Torulaspora delbrueckii Trametes versicolor Tremella mesenterica Trichoderma asperellum Trichoderma atroviride Trichoderma citrinoviride Trichoderma gamsii Trichoderma harzianum Trichoderma reesei Trichoderma virens Trichophyton benhamiae Trichophyton rubrum Trichophyton verrucosum Trichosporon asahii Tsuchiyaea wingfieldii Tuber melanosporum Uncinocarpus reesii Ustilago maydis Vanderwaltozyma polyspora Vavraia culicis Verruconis gallopava Verticillium alfalfae Verticillium dahliae Vittaforma corneae Wallemia ichthyophaga Wallemia mellicola Wickerhamomyces anomalus Wickerhamomyces ciferrii Xylona heveae Yarrowia lipolytica Zygosaccharomyces rouxii Repeat Type Mono Di Tri Tetra Penta Hexa Compound

Fungi Non-Genic Region

Primer Id Repeat Sequence Organism Name Ajellomyces dermatitidis Amorphotheca resinae Anthracocystis flocculosa Arthrobotrys oligospora Arthroderma otae Ascoidea rubescens Aspergillus aculeatus Aspergillus bombycis Aspergillus campestris Aspergillus candidus Aspergillus clavatus Aspergillus fischeri Aspergillus flavus Aspergillus fumigatus Aspergillus glaucus Aspergillus nidulans Aspergillus niger Aspergillus nomius Aspergillus novofumigatus Aspergillus oryzae Aspergillus steynii Aspergillus terreus Aureobasidium namibiae Aureobasidium subglaciale Babjeviella inositovora Batrachochytrium dendrobatidis Baudoinia panamericana Beauveria bassiana Bipolaris maydis Bipolaris oryzae Bipolaris sorokiniana Bipolaris victoriae Bipolaris zeicola Botrytis cinerea Candida albicans Candida dubliniensis Candida orthopsilosis Candida tanzawaensis Candida tropicalis Capronia coronata Capronia epimyces Cercospora beticola Chaetomium globosum Chaetomium thermophilum Cladophialophora carrionii Cladophialophora immunda Cladophialophora psammophila Cladophialophora yegresii Clavispora lusitaniae Coccidioides immitis Coccidioides posadasii Colletotrichum graminicola Colletotrichum higginsianum Colletotrichum orchidophilum Coniophora puteana Coniosporium apollinis Coprinopsis cinerea Cordyceps fumosorosea Cordyceps militaris Cryptococcus amylolentus Cryptococcus gattii Cryptococcus neoformans Cutaneotrichosporon oleaginosus Cyberlindnera jadinii Cyphellophora europaea Debaryomyces fabryi Debaryomyces hansenii Dichomitus squalens Diplodia corticola Encephalitozoon cuniculi Encephalitozoon hellem Encephalitozoon intestinalis Encephalitozoon romaleae Endocarpon pusillum Eremothecium cymbalariae Eremothecium gossypii Eremothecium sinecaudum Exophiala aquamarina Exophiala dermatitidis Exophiala mesophila Exophiala oligosperma Exophiala spinifera Exophiala xenobiotica Fibroporia radiculosa Fomitiporia mediterranea Fonsecaea erecta Fonsecaea monophora Fonsecaea multimorphosa Fonsecaea nubica Fonsecaea pedrosoi Fusarium fujikuroi Fusarium graminearum Fusarium oxysporum Fusarium pseudograminearum Fusarium verticillioides Gaeumannomyces tritici Glarea lozoyensis Gloeophyllum trabeum Grosmannia clavigera Heterobasidion irregulare Histoplasma capsulatum Hyphopichia burtonii Kalmanozyma brasiliensis Kazachstania africana Kazachstania naganishii Kluyveromyces lactis Kluyveromyces marxianus Kockovaella imperatae Komagataella phaffii Kuraishia capsulata Kwoniella bestiolae Kwoniella dejecticola Kwoniella mangroviensis Kwoniella pini Laccaria bicolor Lachancea lanzarotensis Lachancea thermotolerans Leptosphaeria maculans Lobosporangium transversale Magnaporthe oryzae Malassezia globosa Malassezia pachydermatis Malassezia sympodialis Marssonina brunnea Melampsora larici-populina Meliniomyces bicolor Metarhizium acridum Metarhizium brunneum Metarhizium robertsii Metschnikowia bicuspidata Meyerozyma guilliermondii Mitosporidium daphniae Mixia osmundae Moesziomyces antarcticus Nannizzia gypsea Naumovozyma castellii Naumovozyma dairenensis Nematocida parisii Neurospora crassa Neurospora tetrasperma Nosema ceranae Ogataea parapolymorpha Ogataea polymorpha Ordospora colligata Paracoccidioides brasiliensis Paracoccidioides lutzii Paraphaeosphaeria sporulosa Parastagonospora nodorum Penicilliopsis zonata Penicillium arizonense Penicillium chrysogenum Penicillium digitatum Penicillium expansum Penicillium marneffei Pestalotiopsis fici Phaeoacremonium minimum Phanerochaete carnosa Phialocephala scopiformis Phialophora attae Phycomyces blakesleeanus Pichia kudriavzevii Pichia membranifaciens Pneumocystis carinii Pneumocystis jirovecii Pneumocystis murina Pochonia chlamydosporia Podospora anserina Postia placenta Pseudocercospora fijiensis Pseudogymnoascus destructans Pseudogymnoascus verrucosus Pseudozyma hubeiensis Puccinia graminis Punctularia strigosozonata Purpureocillium lilacinum Pyrenophora tritici-repentis Ramularia collo-cygni Rasamsonia emersonii Rhinocladiella mackenziei Rhizopus microsporus Rhodotorula graminis Rhodotorula toruloides Saccharomyces cerevisiae Saccharomyces eubayanus Saitoella complicata Scedosporium apiospermum Scheffersomyces stipitis Schizophyllum commune Schizosaccharomyces cryophilus Schizosaccharomyces japonicus Schizosaccharomyces octosporus Schizosaccharomyces pombe Sclerotinia sclerotiorum Serpula lacrymans Setosphaeria turcica sorbophila strain Sordaria macrospora Spathaspora passalidarum Sphaerulina musiva Spizellomyces punctatus Sporothrix schenckii Stereum hirsutum Sugiyamaella lignohabitans Talaromyces atroroseus Talaromyces stipitatus Tetrapisispora blattae Tetrapisispora phaffii Thermothelomyces thermophila Thielavia terrestris Tilletiaria anomala Torulaspora delbrueckii Trametes versicolor Tremella mesenterica Trichoderma asperellum Trichoderma atroviride Trichoderma citrinoviride Trichoderma gamsii Trichoderma harzianum Trichoderma reesei Trichoderma virens Trichophyton benhamiae Trichophyton rubrum Trichophyton verrucosum Trichosporon asahii Tsuchiyaea wingfieldii Tuber melanosporum Uncinocarpus reesii Ustilago maydis Vanderwaltozyma polyspora Vavraia culicis Verruconis gallopava Verticillium alfalfae Verticillium dahliae Vittaforma corneae Wallemia ichthyophaga Wallemia mellicola Wickerhamomyces anomalus Wickerhamomyces ciferrii Xylona heveae Yarrowia lipolytica Zygosaccharomyces rouxii Repeat Type Mono Di Tri Tetra Penta Hexa Compound

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