SSRome Genomic Database

Metazoa Genic Region

Search instructions:

* Please enter your interested "SSR Repeat Sequence" (e.g. (TGA)5 ) in the Repeat Sequence field "Optional".

* Please enter your interested "Gene symbol or Locus tag" (e.g. BCAR3 or LOC105620951) in Gene symbol or Locus tag field "Optional".

* Please select "Organism Name" from Organism Name drop-down menu "required".

* Please select "Repeat Type" from Repeat Type drop-down menu "required".

* Customize all options, then press "Search" button to get your results.

Repeat Sequence Gene symbol or Locus tag Organism Name Homo sapiens Acanthaster planci Acropora digitifera Acyrthosiphon pisum Amphimedon queenslandica Anas platyrhynchos Anolis carolinensis Anopheles gambiae Apis mellifera Apteryx australis mantelli Astyanax mexicanus Atta cephalotes Balaenoptera acutorostrata scammoni Boleophthalmus pectinirostris Bombus impatiens Bombyx mori Bos mutus Bos taurus Branchiostoma floridae Brugia malayi Bubalus bubalis Caenorhabditis briggsae Camelus dromedarius Camelus ferus Camponotus floridanus Canis lupus familiaris Capra hircus Castor canadensis Chelonia mydas Chlorocebus sabaeus Chrysemys picta Ciona intestinalis Columba livia Corvus cornix Coturnix japonica Crassostrea gigas Cricetulus griseus Culex quinquefasciatus Cynoglossus semilaevis Danio rerio Diuraphis noxia Drosophila melanogaster Egretta garzetta Equus asinus Equus caballus Equus przewalskii Esox lucius Exaiptasia pallida Falco cherrug Felis catus Ficedula albicollis Folsomia candida Gallus gallus Geospiza fortis Gorilla gorilla gorilla Harpegnathos saltator Helobdella robusta Heterocephalus glaber Hippocampus comes Hipposideros armiger Hydra vulgaris Ictalurus punctatus Larimichthys crocea Latimeria chalumnae Linepithema humile Lingula anatina Lipotes vexillifer Loa loa Lottia gigantea Loxodonta africana Macaca fascicularis Macaca mulatta Maylandia zebra Meleagris gallopavo Mizuhopecten yessoensis Musca domestica Mus musculus Myotis brandtii Myotis davidii Nannospalax galili Nanorana parkeri Nasonia vitripennis Necator americanus Nematostella vectensis Nicrophorus vespilloides Nomascus leucogenys Nothobranchius furzeri Notothenia coriiceps Octopus bimaculoides Odobenus rosmarus divergens Opisthorchis viverrini Orcinus orca Ornithorhynchus anatinus Oryctolagus cuniculus Oryzias latipes Ovis aries Panthera tigris altaica Pantholops hodgsonii Pan paniscus Pan troglodytes Papilio machaon Parus major Pediculus humanus corporis Pelodiscus sinensis Pieris rapae Plutella xylostella Poecilia reticulata Pogona vitticeps Pogonomyrmex barbatus Pongo abelii Pseudopodoces humilis Pteropus alecto Python bivittatus Rattus norvegicus Rhinolophus sinicus Rhinopithecus roxellana Saccoglossus kowalevskii Saimiri boliviensis boliviensis Schistosoma haematobium Schistosoma mansoni Scleropages formosus Sinocyclocheilus anshuiensis Sinocyclocheilus grahami Sinocyclocheilus rhinocerous Solenopsis invicta Strongylocentrotus purpuratus Struthio camelus australis Taeniopygia guttata Takifugu rubripes Tetranychus urticae Tribolium castaneum Trichinella spiralis Trichogramma pretiosum Xenopus tropicalis Xiphophorus maculatus Zootermopsis nevadensis Repeat Type Mono Di Tri Tetra Penta Hexa Compound

---

Metazoa Non-Genic Region

Search instructions:

* Please enter your interested "SSRome Primer ID" (e.g. MigSSR_4489665) in the Primer ID field "Optional".

* Please enter your interested "SSR Repeat Sequence" (e.g. (TGA)5 ) in the Repeat Sequence field "Optional".

* Please select "Organism Name" from Organism Name drop-down menu "required".

* Please select "Repeat Type" from Repeat Type drop-down menu "required".

* Customize all options, then press "Search" button to get your results.

Primer Id Repeat Sequence Organism Name Homo sapiens Acanthaster planci Acropora digitifera Acyrthosiphon pisum Amphimedon queenslandica Anas platyrhynchos Anolis carolinensis Anopheles gambiae Apis mellifera Apteryx australis mantelli Astyanax mexicanus Atta cephalotes Balaenoptera acutorostrata scammoni Boleophthalmus pectinirostris Bombus impatiens Bombyx mori Bos mutus Bos taurus Branchiostoma floridae Brugia malayi Bubalus bubalis Caenorhabditis briggsae Camelus dromedarius Camelus ferus Camponotus floridanus Canis lupus familiaris Capra hircus Castor canadensis Chelonia mydas Chlorocebus sabaeus Chrysemys picta Ciona intestinalis Columba livia Corvus cornix Coturnix japonica Crassostrea gigas Cricetulus griseus Culex quinquefasciatus Cynoglossus semilaevis Danio rerio Diuraphis noxia Drosophila melanogaster Egretta garzetta Equus asinus Equus caballus Equus przewalskii Esox lucius Exaiptasia pallida Falco cherrug Felis catus Ficedula albicollis Folsomia candida Gallus gallus Geospiza fortis Gorilla gorilla gorilla Harpegnathos saltator Helobdella robusta Heterocephalus glaber Hippocampus comes Hipposideros armiger Hydra vulgaris Ictalurus punctatus Larimichthys crocea Latimeria chalumnae Linepithema humile Lingula anatina Lipotes vexillifer Loa loa Lottia gigantea Loxodonta africana Macaca fascicularis Macaca mulatta Maylandia zebra Meleagris gallopavo Mizuhopecten yessoensis Musca domestica Mus musculus Myotis brandtii Myotis davidii Nannospalax galili Nanorana parkeri Nasonia vitripennis Necator americanus Nematostella vectensis Nicrophorus vespilloides Nomascus leucogenys Nothobranchius furzeri Notothenia coriiceps Octopus bimaculoides Odobenus rosmarus divergens Opisthorchis viverrini Orcinus orca Ornithorhynchus anatinus Oryctolagus cuniculus Oryzias latipes Ovis aries Panthera tigris altaica Pantholops hodgsonii Pan paniscus Pan troglodytes Papilio machaon Parus major Pediculus humanus corporis Pelodiscus sinensis Pieris rapae Plutella xylostella Poecilia reticulata Pogona vitticeps Pogonomyrmex barbatus Pongo abelii Pseudopodoces humilis Pteropus alecto Python bivittatus Rattus norvegicus Rhinolophus sinicus Rhinopithecus roxellana Saccoglossus kowalevskii Saimiri boliviensis boliviensis Schistosoma haematobium Schistosoma mansoni Scleropages formosus Sinocyclocheilus anshuiensis Sinocyclocheilus grahami Sinocyclocheilus rhinocerous Solenopsis invicta Strongylocentrotus purpuratus Struthio camelus australis Taeniopygia guttata Takifugu rubripes Tetranychus urticae Tribolium castaneum Trichinella spiralis Trichogramma pretiosum Xenopus tropicalis Xiphophorus maculatus Zootermopsis nevadensis Repeat Type Di Tri Tetra Penta Hexa Compound