SSRome Genomic Database

Archaea

Archaea Genic Region

Search instructions:

* Please enter your interested "SSR Repeat Sequence" (e.g. (AGA)6 ) in the Repeat Sequence field "Optional".

* Please enter your interested "Gene symbol or Locus tag" in Gene symbol or Locus tag field "Optional".

* Please select "Organism Name" from Organism Name drop-down menu "required".

* Please select "Repeat Type" from Repeat Type drop-down menu "required".

* Customize all options, then press "Search" button to get your results.

Repeat Sequence Gene symbol or Locus tag Organism Name Haloquadratum walsbyi Acidiplasma aeolicum Caldivirga sp. Candidatus Acidianus Candidatus Halobonum Candidatus Methanomethylophilus Candidatus Methanoperedens Candidatus Micrarchaeota Candidatus Nitrosoarchaeum Haloferax prahovense Haloferax sulfurifontis Haloferax volcanii Halogeometricum borinquense Halogeometricum limi Halogeometricum pallidum Halogeometricum rufum Halogranum amylolyticum Halogranum gelatinilyticum Halogranum rubrum Halogranum salarium Halohasta litchfieldiae Halolamina pelagica Halolamina rubra Halolamina sp. Halomicrobium katesii Halomicrobium zhouii Haloparvum sedimenti Halopelagius inordinatus Halopelagius longus Halopenitus malekzadehii Halopenitus persicus Halopiger djelfimassiliensis Halopiger salifodinae Halopiger xanaduensis Haloplanus natans Haloplanus vescus Haloprofundus marisrubri Haloquadratum walsbyi Halorhabdus tiamatea Halorientalis persicus Halorientalis regularis Halorientalis sp. Halorubrum aethiopicum Halorubrum aidingense Halorubrum arcis Halorubrum californiensis Halorubrum chaoviator Halorubrum coriense Halorubrum distributum Halorubrum ezzemoulense Halorubrum halodurans Halorubrum halophilum Halorubrum hochstenium Halorubrum kocurii Halorubrum lacusprofundi Halorubrum lipolyticum Halorubrum litoreum Halorubrum persicum Halorubrum saccharovorum Halorubrum sodomense Halorubrum sp. Halorubrum tebenquichense Halorubrum terrestre Halorubrum trapanicum Halorubrum tropicale Halorubrum vacuolatum Halosimplex carlsbadense Halostagnicola kamekurae Halostagnicola larsenii Halostagnicola sp. Haloterrigena daqingensis Haloterrigena hispanica Haloterrigena jeotgali Haloterrigena limicola Haloterrigena mahii Haloterrigena saccharevitans Haloterrigena salina Haloterrigena thermotolerans Haloterrigena turkmenica Halovenus aranensis Halovivax asiaticus Metallosphaera yellowstonensis Methanobacterium arcticum Methanobacterium bryantii Methanobacterium congolense Methanobacterium formicicum Methanobacterium sp. Methanobacterium veterum Methanobrevibacter arboriphilus Methanobrevibacter boviskoreani Methanobrevibacter curvatus Methanobrevibacter cuticularis Methanobrevibacter filiformis Methanobrevibacter gottschalkii Methanobrevibacter olleyae Methanobrevibacter oralis Methanobrevibacter smithii Methanobrevibacter sp. Methanobrevibacter wolinii Methanocaldococcus fervens Methanocaldococcus sp. Methanocaldococcus villosus Methanococcoides methylutens Methanococcoides vulcani Methanocorpusculum bavaricum Methanocorpusculum parvum Methanoculleus chikugoensis Methanoculleus horonobensis Methanoculleus sediminis Methanoculleus sp. Methanoculleus thermophilus Methanogenium cariaci Methanohalobium evestigatum Methanohalophilus euhalobius Methanohalophilus halophilus Methanohalophilus portucalensis Methanolacinia paynteri Methanolobus profundi Methanolobus psychrotolerans Methanolobus vulcani Methanomassiliicoccus luminyensis Methanomethylovorans hollandica Methanonatronarchaeum thermophilum Methanosaeta harundinacea Methanosarcina flavescens Methanosarcina mazei Repeat Type Mono Di Tri Tetra Penta Hexa Compound

Archaea Non-Genic Region

Search instructions:

* Please enter your interested "SSRome Primer ID" in the Primer ID field "Optional".

* Please enter your interested "SSR Repeat Sequence" (e.g. (TG)6 ) in the Repeat Sequence field "Optional".

* Please select "Organism Name" from Organism Name drop-down menu "required".

* Please select "Repeat Type" from Repeat Type drop-down menu "required".

* Customize all options, then press "Search" button to get your results.

Primer Id Repeat Sequence Organism Name Acidiplasma aeolicum Caldivirga sp. Candidatus Acidianus Candidatus Halobonum Candidatus Methanomethylophilus Candidatus Methanoperedens Candidatus Micrarchaeota Candidatus Nitrosoarchaeum Haloferax prahovense Haloferax sulfurifontis Haloferax volcanii Halogeometricum borinquense Halogeometricum limi Halogeometricum pallidum Halogeometricum rufum Halogranum amylolyticum Halogranum gelatinilyticum Halogranum rubrum Halogranum salarium Halohasta litchfieldiae Halolamina pelagica Halolamina rubra Halolamina sp. Halomicrobium katesii Halomicrobium zhouii Haloparvum sedimenti Halopelagius inordinatus Halopelagius longus Halopenitus malekzadehii Halopenitus persicus Halopiger djelfimassiliensis Halopiger salifodinae Halopiger xanaduensis Haloplanus natans Haloplanus vescus Haloprofundus marisrubri Haloquadratum walsbyi Halorhabdus tiamatea Halorientalis persicus Halorientalis regularis Halorientalis sp. Halorubrum aethiopicum Halorubrum aidingense Halorubrum arcis Halorubrum californiensis Halorubrum chaoviator Halorubrum coriense Halorubrum distributum Halorubrum ezzemoulense Halorubrum halodurans Halorubrum halophilum Halorubrum hochstenium Halorubrum kocurii Halorubrum lacusprofundi Halorubrum lipolyticum Halorubrum litoreum Halorubrum persicum Halorubrum saccharovorum Halorubrum sodomense Halorubrum sp. Halorubrum tebenquichense Halorubrum terrestre Halorubrum trapanicum Halorubrum tropicale Halorubrum vacuolatum Halosimplex carlsbadense Halostagnicola kamekurae Halostagnicola larsenii Halostagnicola sp. Haloterrigena daqingensis Haloterrigena hispanica Haloterrigena jeotgali Haloterrigena limicola Haloterrigena mahii Haloterrigena saccharevitans Haloterrigena salina Haloterrigena thermotolerans Haloterrigena turkmenica Halovenus aranensis Halovivax asiaticus Metallosphaera yellowstonensis Methanobacterium arcticum Methanobacterium bryantii Methanobacterium congolense Methanobacterium formicicum Methanobacterium sp. Methanobacterium veterum Methanobrevibacter arboriphilus Methanobrevibacter boviskoreani Methanobrevibacter curvatus Methanobrevibacter cuticularis Methanobrevibacter filiformis Methanobrevibacter gottschalkii Methanobrevibacter olleyae Methanobrevibacter oralis Methanobrevibacter smithii Methanobrevibacter sp. Methanobrevibacter wolinii Methanocaldococcus fervens Methanocaldococcus sp. Methanocaldococcus villosus Methanococcoides methylutens Methanococcoides vulcani Methanocorpusculum bavaricum Methanocorpusculum parvum Methanoculleus chikugoensis Methanoculleus horonobensis Methanoculleus sediminis Methanoculleus sp. Methanoculleus thermophilus Methanogenium cariaci Methanohalobium evestigatum Methanohalophilus euhalobius Methanohalophilus halophilus Methanohalophilus portucalensis Methanolacinia paynteri Methanolobus profundi Methanolobus psychrotolerans Methanolobus vulcani Methanomassiliicoccus luminyensis Methanomethylovorans hollandica Methanonatronarchaeum thermophilum Methanosaeta harundinacea Methanosarcina flavescens Methanosarcina mazei Repeat Type Mono Di Tri Tetra Penta Hexa Compound

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Bacteria

Bacteria Genic Region

Repeat Sequence Gene symbol or Locus tag Organism Name Anoxybacillus gonensis Acidaminococcus timonensis Acidibacillus ferrooxidans Acidiferrobacter thiooxydans Acidihalobacter ferrooxidans Acidihalobacter prosperus Acidimicrobium ferrooxidans Acidiphilium angustum Acidiphilium cryptum Acidiphilium multivorum Acidipropionibacterium acidipropionici Acidipropionibacterium jensenii Acidipropionibacterium thoenii Acidisphaera rubrifaciens Acidithiobacillus albertensis Acidithiobacillus caldus Acidithiobacillus ferrivorans Acidithiobacillus ferrooxidans Acidithiobacillus thiooxidans Acidithrix ferrooxidans Acidobacteria bacterium Acidobacteriaceae bacterium Acidobacterium ailaaui Acidobacterium capsulatum Acidocella aminolytica Acidocella facilis Acidomonas methanolica Acidothermus cellulolyticus Acidovorax avenae Acidovorax caeni Acidovorax cattleyae Acidovorax citrulli Acidovorax delafieldii Acidovorax ebreus Acidovorax kalamii Acidovorax konjaci Acidovorax oryzae Acidovorax radicis Acidovorax soli Allobaculum stercoricanis Allochromatium vinosum Allochromatium warmingii Allofrancisella guangzhouensis Allofustis seminis Alloiococcus otitis Allokutzneria albata Allonocardiopsis opalescens Alloprevotella rava Alloprevotella tannerae Allosalinactinospora lopnorensis Alloscardovia criceti Alloscardovia macacae Alloscardovia omnicolens Altererythrobacter atlanticus Altererythrobacter dongtanensis Altererythrobacter epoxidivorans Altererythrobacter ishigakiensis Altererythrobacter mangrovi Altererythrobacter marensis Altererythrobacter namhicola Altererythrobacter troitsensis Alteribacillus bidgolensis Alteribacillus iranensis Alteribacillus persepolensis Alteromonadaceae bacterium Alteromonadales bacterium Alteromonas abrolhosensis Alteromonas addita Alteromonas australica Alteromonas confluentis Alteromonas gracilis Alteromonas lipolytica Alteromonas macleodii Alteromonas marina Alteromonas mediterranea Alteromonas naphthalenivorans Alteromonas pelagimontana Alteromonas stellipolaris Altibacter lentus Alysiella crassa Amantichitinum ursilacus Aminiphilus circumscriptus Aminobacter aminovorans Aminobacterium colombiense Aminobacterium mobile Aminomonas paucivorans Ammonifex degensii Amorphus coralli Amphibacillus jilinensis Amphibacillus marinus Amphibacillus sediminis Amphibacillus xylanus Amphritea atlantica Amphritea japonica Amycolatopsis alba Amycolatopsis australiensis Amycolatopsis azurea Amycolatopsis balhimycina Amycolatopsis benzoatilytica Amycolatopsis coloradensis Amycolatopsis decaplanina Amycolatopsis halophila Amycolatopsis japonica Amycolatopsis jejuensis Amycolatopsis kentuckyensis Amycolatopsis keratiniphila Amycolatopsis lexingtonensis Amycolatopsis lurida Amycolatopsis marina Amycolatopsis mediterranei Amycolatopsis methanolica Amycolatopsis nigrescens Amycolatopsis niigatensis Amycolatopsis orientalis Amycolatopsis pretoriensis Amycolatopsis regifaucium Amycolatopsis rifamycinica Amycolatopsis rubida Amycolatopsis saalfeldensis Amycolatopsis sacchari Amycolatopsis sp. Amycolatopsis sulphurea Amycolatopsis taiwanensis Amycolatopsis thailandensis Amycolatopsis thermoflava Amycolatopsis tolypomycina Amycolatopsis vancoresmycina Amycolatopsis xylanica Amylibacter cionae Anabaena cylindrica Anabaenopsis circularis Anaeroarcus burkinensis Anaerobacillus alkalidiazotrophicus Anaerobacillus alkalilacustris Anaerobacillus arseniciselenatis Anaerobacillus isosaccharinicus Anaerobacillus macyae Anaerobiospirillum succiniciproducens Anaerobium acetethylicum Anaerobranca gottschalkii Anaerococcus hydrogenalis Anaerococcus lactolyticus Anaerococcus obesiensis Anaerococcus octavius Anaerococcus pacaensis Anaerococcus prevotii Anaerococcus provencensis Anaerococcus rubeinfantis Anaerococcus senegalensis Anaerococcus tetradius Anaerococcus vaginalis Anaerocolumna aminovalerica Anaerofustis stercorihominis Anaeroglobus geminatus Anaerolineaceae bacterium Anaerolinea thermolimosa Anaerolinea thermophila Anaeromassilibacillus senegalensis Anaeromicrobium sediminis Anaeromusa acidaminophila Anaeromyxobacter dehalogenans Anaerophaga thermohalophila Anaerosalibacter massiliensis Anaerosporomusa subterranea Anaerostipes caccae Anaerostipes hadrus Anaerotignum lactatifermentans Anaerotignum neopropionicum Anaerotruncus colihominis Anaerotruncus rubiinfantis Anaerovibrio lipolyticus Anaerovorax odorimutans Anaplasma centrale Anaplasma marginale Anaplasma ovis Anaplasma phagocytophilum Ancylobacter rudongensis Anditalea andensis Andreesenia angusta Andreprevotia chitinilytica Aneurinibacillus aneurinilyticus Aneurinibacillus migulanus Aneurinibacillus soli Aneurinibacillus terranovensis Aneurinibacillus thermoaerophilus Aneurinibacillus tyrosinisolvens Angelakisella massiliensis Anoxybacillus amylolyticus Anoxybacillus ayderensis Anoxybacillus flavithermus Anoxybacillus geothermalis Anoxybacillus gonensis Anoxybacillus kamchatkensis Anoxybacillus mongoliensis Anoxybacillus pushchinoensis Anoxybacillus suryakundensis Anoxybacillus tepidamans Anoxybacillus thermarum Antarctobacter heliothermus Antricoccus suffuscus Aphanizomenon flos-aquae Aphanothece hegewaldii Apibacter adventoris Apibacter mensalis Aquabacterium parvum Aquamicrobium aerolatum Aquamicrobium defluvii Aquaspirillum serpens Aquidulcibacter paucihalophilus Aquifex aeolicus Aquimarina agarilytica Aquimarina agarivorans Aquimarina aggregata Aquimarina amphilecti Aquimarina atlantica Aquimarina latercula Aquimarina longa Aquimarina macrocephali Aquimarina megaterium Aquimarina muelleri Aquimarina pacifica Aquimonas voraii Aquincola tertiaricarbonis Aquisalimonas asiatica Aquitalea magnusonii Aquitalea pelogenes Arachidicoccus rhizosphaerae Arcanobacterium haemolyticum Arcanobacterium phocae Arcanobacterium urinimassiliense Archangium gephyra Archangium violaceum Arcobacter anaerophilus Arcobacter butzleri Arcobacter canalis Arcobacter cibarius Arcobacter cryaerophilus Arcobacter faecis Arcobacter haliotis Arcobacter halophilus Arcobacter lanthieri Arcobacter lekithochrous Arcobacter marinus Arcobacter molluscorum Arcobacter nitrofigilis Arcobacter porcinus Arcobacter skirrowii Arcobacter thereius Arcticibacter eurypsychrophilus Arcticibacter pallidicorallinus Arcticibacter svalbardensis Ardenticatena maritima Arenibacter algicola Arenibacter catalasegens Arenibacter certesii Arenibacter hampyeongensis Arenibacter latericius Arenimonas composti Arenimonas donghaensis Arenimonas malthae Arenimonas metalli Arenimonas oryziterrae Arenitalea lutea Arhodomonas aquaeolei Armatimonadetes bacterium Arsenicibacter rosenii Arsenicicoccus bolidensis Arsenophonus endosymbiont Arsenophonus nasoniae Arsukibacterium ikkense Arthrobacter agilis Arthrobacter alpinus Arthrobacter castelli Arthrobacter crystallopoietes Arthrobacter cupressi Arthrobacter enclensis Arthrobacter globiformis Arthrobacter koreensis Arthrobacter luteolus Arthrobacter nitrophenolicus Arthrobacter pityocampae Arthrobacter ruber Arthrobacter subterraneus Arthrobacter woluwensis Arthrospira maxima Arthrospira platensis Asaia astilbis Asaia bogorensis Asaia platycodi Asaia prunellae Asanoa ishikariensis Aster yellows Asticcacaulis benevestitus Asticcacaulis biprosthecum Asticcacaulis excentricus Asticcacaulis taihuensis Atlantibacter hermannii Atopobacter phocae Atopobium deltae Atopobium fossor Atopobium minutum Atopobium parvulum Atopobium rimae Atopobium vaginae Atopococcus tabaci Atribacteria bacterium Aulosira laxa Aurantimicrobium minutum Aurantimonadaceae bacterium Aurantimonas coralicida Aurantimonas manganoxydans Auraticoccus monumenti Aureicoccus marinus Aureimonas altamirensis Aureimonas frigidaquae Aureimonas jatrophae Aureimonas phyllosphaerae Aureimonas ureilytica Aureitalea marina Auricoccus indicus Austwickia chelonae Avibacterium endocarditidis Avibacterium gallinarum Avibacterium paragallinarum Azoarcus aromaticum Azoarcus olearius Azoarcus toluclasticus Azohydromonas australica Azohydromonas lata Azonexus hydrophilus Azorhizobium caulinodans Azorhizobium doebereinerae Azospirillum brasilense Azospirillum halopraeferens Azospirillum humicireducens Azospirillum lipoferum Azospirillum thiophilum Azotobacter beijerinckii Azotobacter chroococcum Azotobacter vinelandii Azovibrio restrictus Bacillaceae bacterium Bacilli bacterium Bacillus abyssalis Bacillus acidiceler Bacillus acidicola Bacillus acidiproducens Bacillus aerophilus Bacillus aidingensis Bacillus akibai Bacillus alcalophilus Bacillus alkalinitrilicus Bacillus alkalitelluris Bacillus altitudinis Bacillus alveayuensis Bacillus amyloliquefaciens Bacillus andreraoultii Bacillus anthracis Bacillus aquimaris Bacillus aryabhattai Bacillus atrophaeus Bacillus aurantiacus Bacillus australimaris Bacillus azotoformans Bacillus badius Bacillus bataviensis Bacillus beveridgei Bacillus bingmayongensis Bacillus bogoriensis Bacillus bombysepticus Bacillus boroniphilus Bacillus butanolivorans Bacillus camelliae Bacillus campisalis Bacillus canaveralius Bacillus caseinilyticus Bacillus cecembensis Bacillus cellulasensis Bacillus cellulosilyticus Bacillus cereus Dechlorosoma suillum Repeat Type Mono Di Tri Tetra Penta Hexa Compound

Bacteria Non-Genic Region

Primer Id Repeat Sequence Organism Name Acidaminococcus timonensis Acidibacillus ferrooxidans Acidiferrobacter thiooxydans Acidihalobacter ferrooxidans Acidihalobacter prosperus Acidimicrobium ferrooxidans Acidiphilium angustum Acidiphilium cryptum Acidiphilium multivorum Acidipropionibacterium acidipropionici Acidipropionibacterium jensenii Acidipropionibacterium thoenii Acidisphaera rubrifaciens Acidithiobacillus albertensis Acidithiobacillus caldus Acidithiobacillus ferrivorans Acidithiobacillus ferrooxidans Acidithiobacillus thiooxidans Acidithrix ferrooxidans Acidobacteria bacterium Acidobacteriaceae bacterium Acidobacterium ailaaui Acidobacterium capsulatum Acidocella aminolytica Acidocella facilis Acidomonas methanolica Acidothermus cellulolyticus Acidovorax avenae Acidovorax caeni Acidovorax cattleyae Acidovorax citrulli Acidovorax delafieldii Acidovorax ebreus Acidovorax kalamii Acidovorax konjaci Acidovorax oryzae Acidovorax radicis Acidovorax soli Allobaculum stercoricanis Allochromatium vinosum Allochromatium warmingii Allofrancisella guangzhouensis Allofustis seminis Alloiococcus otitis Allokutzneria albata Allonocardiopsis opalescens Alloprevotella rava Alloprevotella tannerae Allosalinactinospora lopnorensis Alloscardovia criceti Alloscardovia macacae Alloscardovia omnicolens Altererythrobacter atlanticus Altererythrobacter dongtanensis Altererythrobacter epoxidivorans Altererythrobacter ishigakiensis Altererythrobacter mangrovi Altererythrobacter marensis Altererythrobacter namhicola Altererythrobacter troitsensis Alteribacillus bidgolensis Alteribacillus iranensis Alteribacillus persepolensis Alteromonadaceae bacterium Alteromonadales bacterium Alteromonas abrolhosensis Alteromonas addita Alteromonas australica Alteromonas confluentis Alteromonas gracilis Alteromonas lipolytica Alteromonas macleodii Alteromonas marina Alteromonas mediterranea Alteromonas naphthalenivorans Alteromonas pelagimontana Alteromonas stellipolaris Altibacter lentus Alysiella crassa Amantichitinum ursilacus Aminiphilus circumscriptus Aminobacter aminovorans Aminobacterium colombiense Aminobacterium mobile Aminomonas paucivorans Ammonifex degensii Amorphus coralli Amphibacillus jilinensis Amphibacillus marinus Amphibacillus sediminis Amphibacillus xylanus Amphritea atlantica Amphritea japonica Amycolatopsis alba Amycolatopsis australiensis Amycolatopsis azurea Amycolatopsis balhimycina Amycolatopsis benzoatilytica Amycolatopsis coloradensis Amycolatopsis decaplanina Amycolatopsis halophila Amycolatopsis japonica Amycolatopsis jejuensis Amycolatopsis kentuckyensis Amycolatopsis keratiniphila Amycolatopsis lexingtonensis Amycolatopsis lurida Amycolatopsis marina Amycolatopsis mediterranei Amycolatopsis methanolica Amycolatopsis nigrescens Amycolatopsis niigatensis Amycolatopsis orientalis Amycolatopsis pretoriensis Amycolatopsis regifaucium Amycolatopsis rifamycinica Amycolatopsis rubida Amycolatopsis saalfeldensis Amycolatopsis sacchari Amycolatopsis sp. Amycolatopsis sulphurea Amycolatopsis taiwanensis Amycolatopsis thailandensis Amycolatopsis thermoflava Amycolatopsis tolypomycina Amycolatopsis vancoresmycina Amycolatopsis xylanica Amylibacter cionae Anabaena cylindrica Anabaenopsis circularis Anaeroarcus burkinensis Anaerobacillus alkalidiazotrophicus Anaerobacillus alkalilacustris Anaerobacillus arseniciselenatis Anaerobacillus isosaccharinicus Anaerobacillus macyae Anaerobiospirillum succiniciproducens Anaerobium acetethylicum Anaerobranca gottschalkii Anaerococcus hydrogenalis Anaerococcus lactolyticus Anaerococcus obesiensis Anaerococcus octavius Anaerococcus pacaensis Anaerococcus prevotii Anaerococcus provencensis Anaerococcus rubeinfantis Anaerococcus senegalensis Anaerococcus tetradius Anaerococcus vaginalis Anaerocolumna aminovalerica Anaerofustis stercorihominis Anaeroglobus geminatus Anaerolineaceae bacterium Anaerolinea thermolimosa Anaerolinea thermophila Anaeromassilibacillus senegalensis Anaeromicrobium sediminis Anaeromusa acidaminophila Anaeromyxobacter dehalogenans Anaerophaga thermohalophila Anaerosalibacter massiliensis Anaerosporomusa subterranea Anaerostipes caccae Anaerostipes hadrus Anaerotignum lactatifermentans Anaerotignum neopropionicum Anaerotruncus colihominis Anaerotruncus rubiinfantis Anaerovibrio lipolyticus Anaerovorax odorimutans Anaplasma centrale Anaplasma marginale Anaplasma ovis Anaplasma phagocytophilum Ancylobacter rudongensis Anditalea andensis Andreesenia angusta Andreprevotia chitinilytica Aneurinibacillus aneurinilyticus Aneurinibacillus migulanus Aneurinibacillus soli Aneurinibacillus terranovensis Aneurinibacillus thermoaerophilus Aneurinibacillus tyrosinisolvens Angelakisella massiliensis Anoxybacillus amylolyticus Anoxybacillus ayderensis Anoxybacillus flavithermus Anoxybacillus geothermalis Anoxybacillus gonensis Anoxybacillus kamchatkensis Anoxybacillus mongoliensis Anoxybacillus pushchinoensis Anoxybacillus suryakundensis Anoxybacillus tepidamans Anoxybacillus thermarum Antarctobacter heliothermus Antricoccus suffuscus Aphanizomenon flos-aquae Aphanothece hegewaldii Apibacter adventoris Apibacter mensalis Aquabacterium parvum Aquamicrobium aerolatum Aquamicrobium defluvii Aquaspirillum serpens Aquidulcibacter paucihalophilus Aquifex aeolicus Aquimarina agarilytica Aquimarina agarivorans Aquimarina aggregata Aquimarina amphilecti Aquimarina atlantica Aquimarina latercula Aquimarina longa Aquimarina macrocephali Aquimarina megaterium Aquimarina muelleri Aquimarina pacifica Aquimonas voraii Aquincola tertiaricarbonis Aquisalimonas asiatica Aquitalea magnusonii Aquitalea pelogenes Arachidicoccus rhizosphaerae Arcanobacterium haemolyticum Arcanobacterium phocae Arcanobacterium urinimassiliense Archangium gephyra Archangium violaceum Arcobacter anaerophilus Arcobacter butzleri Arcobacter canalis Arcobacter cibarius Arcobacter cryaerophilus Arcobacter faecis Arcobacter haliotis Arcobacter halophilus Arcobacter lanthieri Arcobacter lekithochrous Arcobacter marinus Arcobacter molluscorum Arcobacter nitrofigilis Arcobacter porcinus Arcobacter skirrowii Arcobacter thereius Arcticibacter eurypsychrophilus Arcticibacter pallidicorallinus Arcticibacter svalbardensis Ardenticatena maritima Arenibacter algicola Arenibacter catalasegens Arenibacter certesii Arenibacter hampyeongensis Arenibacter latericius Arenimonas composti Arenimonas donghaensis Arenimonas malthae Arenimonas metalli Arenimonas oryziterrae Arenitalea lutea Arhodomonas aquaeolei Armatimonadetes bacterium Arsenicibacter rosenii Arsenicicoccus bolidensis Arsenophonus endosymbiont Arsenophonus nasoniae Arsukibacterium ikkense Arthrobacter agilis Arthrobacter alpinus Arthrobacter castelli Arthrobacter crystallopoietes Arthrobacter cupressi Arthrobacter enclensis Arthrobacter globiformis Arthrobacter koreensis Arthrobacter luteolus Arthrobacter nitrophenolicus Arthrobacter pityocampae Arthrobacter ruber Arthrobacter subterraneus Arthrobacter woluwensis Arthrospira maxima Arthrospira platensis Asaia astilbis Asaia bogorensis Asaia platycodi Asaia prunellae Asanoa ishikariensis Aster yellows Asticcacaulis benevestitus Asticcacaulis biprosthecum Asticcacaulis excentricus Asticcacaulis taihuensis Atlantibacter hermannii Atopobacter phocae Atopobium deltae Atopobium fossor Atopobium minutum Atopobium parvulum Atopobium rimae Atopobium vaginae Atopococcus tabaci Atribacteria bacterium Aulosira laxa Aurantimicrobium minutum Aurantimonadaceae bacterium Aurantimonas coralicida Aurantimonas manganoxydans Auraticoccus monumenti Aureicoccus marinus Aureimonas altamirensis Aureimonas frigidaquae Aureimonas jatrophae Aureimonas phyllosphaerae Aureimonas ureilytica Aureitalea marina Auricoccus indicus Austwickia chelonae Avibacterium endocarditidis Avibacterium gallinarum Avibacterium paragallinarum Azoarcus aromaticum Azoarcus olearius Azoarcus toluclasticus Azohydromonas australica Azohydromonas lata Azonexus hydrophilus Azorhizobium caulinodans Azorhizobium doebereinerae Azospirillum brasilense Azospirillum halopraeferens Azospirillum humicireducens Azospirillum lipoferum Azospirillum thiophilum Azotobacter beijerinckii Azotobacter chroococcum Azotobacter vinelandii Azovibrio restrictus Bacillaceae bacterium Bacilli bacterium Bacillus abyssalis Bacillus acidiceler Bacillus acidicola Bacillus acidiproducens Bacillus aerophilus Bacillus aidingensis Bacillus akibai Bacillus alcalophilus Bacillus alkalinitrilicus Bacillus alkalitelluris Bacillus altitudinis Bacillus alveayuensis Bacillus amyloliquefaciens Bacillus andreraoultii Bacillus anthracis Bacillus aquimaris Bacillus aryabhattai Bacillus atrophaeus Bacillus aurantiacus Bacillus australimaris Bacillus azotoformans Bacillus badius Bacillus bataviensis Bacillus beveridgei Bacillus bingmayongensis Bacillus bogoriensis Bacillus bombysepticus Bacillus boroniphilus Bacillus butanolivorans Bacillus camelliae Bacillus campisalis Bacillus canaveralius Bacillus caseinilyticus Bacillus cecembensis Bacillus cellulasensis Bacillus cellulosilyticus Bacillus cereus Dechlorosoma suillum Repeat Type Mono Di Tri Tetra Penta Hexa Compound

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Virus

Virus Genic Region

Repeat Sequence Gene symbol or Locus tag Organism Name Choristoneura fumiferana granulovirus Abalone herpesvirus Abalone shriveling syndrome-associated virus Acanthocystis turfacea Chlorella virus 1 Achromobacter phage Acidianus filamentous virus 2 Acidianus tailed spindle virus Acidianus two-tailed virus Acinetobacter phage Aconitum latent virus Actinidia virus 1 Acyrthosiphon pisum bacteriophage Adoxophyes honmai Adoxophyes orana Aedes alboannulatus toti-like virus 1 Aedes taeniorhynchus iridescent virus Aeromonas phage African green monkey polyomavirus African swine fever virus Ageratum conyzoides symptomless alphasatellite Ageratum enation alphasatellite Ageratum leaf Cameroon betasatellite Ageratum leaf curl Ageratum yellow vein Aggregatibacter phage S1249 Agrotis ipsilon multiple nucleopolyhedrovirus Agrotis segetum Ailuropoda melanoleuca Alcelaphine herpesvirus Aleutian mink disease virus Alfalfa leaf curl virus Alternanthera yellow vein virus Alternaria longipes dsRNA virus 1 Ambystoma tigrinum virus Amsacta moorei entomopoxvirus Anabaena phage A-4L Anatid herpesvirus 1 Andrographis yellow vein leaf curl Anguillid herpesvirus 1 Anomala cuprea entomopoxvirus DNA Anopheles minimus irodovirus Antheraea pernyi nucleopolyhedrovirus Anticarsia gemmatalis Aotine herpesvirus Apocheima cinerarium nucleopolyhedrovirus Apple chlorotic leaf spot virus Arabis mosaic virus RNA 2 Aravan virus Archaeal BJ1 virus Arthrobacter phage Artichoke latent virus isolate FR37 Artogeia rapae granulovirus Asclepias asymptomatic virus Asparagus virus 3 Asterionellopsis glacialis RNA virus Astrovirus wild Ateline alphaherpesvirus 1 Atlantic salmon swim bladder sarcoma virus Aurantimonas phage AmM-1 DNA Aureococcus anophagefferens virus Australian bat lyssavirus Autographa californica nucleopolyhedrovirus Avian carcinoma virus Avian myelocytomatosis virus Avian paramyxovirus Avian sapelovirus Avon-Heathcote Estuary Azospirillum phage Cd Baboon endogenous virus Bacillariodnavirus LDMD-2013 Bacillus cereus bacteriophage Bacillus phage Bacteriophage Ball python nidovirus Banana mild mosaic virus Banana streak CA virus Banana streak virus Bank vole polyomavirus Barley stripe mosaic virus Bat adenovirus Bat circovirus isolate Acheng30 Bathycoccus sp. RCC1105 virus BpV1 Bat mastadenovirus Bat polyomavirus Bdellovibrio phage phi1422 Beak and feather disease virus BeAn 58058 virus Bean calico mosaic virus DNA B Bean leafroll virus Bean yellow disorder virus RNA 1 Beet necrotic yellow vein virus Beet virus Q RNA 1 Bitter gourd leaf curl disease-associated BK polyomavirus Blackberry virus E Black sea bass polyomavirus 1 Blueberry virus A Bombyx mori densovirus 3 Bombyx mori Macula-like virus Bombyx mori NPV Bordetella phage BPP-1 Bos taurus papillomavirus Bovine adenovirus Bovine ephemeral fever virus Bovine faeces associated circular DNA virus 2 Bovine herpesvirus Bovine papillomavirus Bovine papular stomatitis virus Brazilian marseillevirus Brevibacillus phage Sundance Broad bean mottle virus RNA 3 Brochothrix phage Brome mosaic virus Bromus catharticus striate mosaic virus Brugmansia suaveolens mottle virus Burkholderia cenocepacia phage BcepB1A Burkholderia cepacia phage Bcep22 Burkholderia phage Buzura suppressaria nucleopolyhedrovirus isolate Hubei Cacao swollen shoot virus Cafeteria roenbergensis virus BV-PW1 Callitrichine herpesvirus 3 Camelpox virus Camelus dromedarius papillomavirus type 1 Campoletis sonorensis ichnovirus Campylobacter phage Canarypox virus Candiru virus Canid herpesvirus Canine papillomavirus Canine parvovirus Canna yellow mottle-associated virus Capra hircus papillomavirus type 1 Caprine parainfluenza virus 3 Cardamine chlorotic fleck virus Cardioderma polyomavirus isolate KY336 Carollia perspicillata polyomavirus Carrot red leaf virus Carrot torradovirus 1RNA2 Cassava associated gemycircularvirus Cassia yellow blotch virus RNA3 Catopsilia pomona nucleopolyhedrovirus Caulobacter phage Cavally virus Caviid herpesvirus Cebus albifrons polyomavirus 1 Cedratvirus A11 Cellulophaga phage Ceratocystis polonica partitivirus Cercopithecine herpesvirus Cereal yellow dwarf virus Cervid adenovirus 1 Chaerephon polyomavirus 1 Chaetoceros socialis f. radians RNA virus Chaetoceros tenuissimus DNA virus Chequa iflavirus Cherry virus A Chicken anemia virus Chicken astrovirus Chicken gallivirus 1 Chicken orivirus 1 Chicken sicinivirus JSY Chickpea chlorosis Australia virus Chikungunya virus Chili leaf curl Bhatinda betasatellite Chilli leaf curl disease associated Chilli leaf curl Multan alphasatellite Chilli veinal mottle virus Chimpanzee adenovirus Y25 Chimpanzee alpha-1 herpesvirus Chimpanzee faeces associated microphage 1 Chlorocebus pygerythrus polyomavirus 3 Choristoneura biennis entomopoxvirus L Choristoneura fumiferana Choristoneura rosaceana Chrysochromulina ericina virus Chrysodeixis chalcites nucleopolyhedrovirus Circoviridae Circovirus-like genome Citrobacter phage Citrus endogenous pararetrovirus Citrus leaf blotch virus Citrus tristeza virus Clanis bilineata nucleopolyhedrosis virus Classical swine fever virus Cleome leaf crumple virus associated DNA 1 Clerodendrum golden mosaic Clostera anachoreta granulovirus Clostera anastomosis granulovirus Henan Clostridium phage c-st Clostridium phage phiCD111 Clover yellow vein virus Cnaphalocrocis medinalis granulovirus Colobus guereza papillomavirus type 2 Colombian potato soil-borne virus RNA 2 Columbid alphaherpesvirus 1 Colwellia phage 9A Common bottlenose dolphin gammaherpesvirus 1 Common vole polyomavirus Condylorrhiza vestigialis MNPV Corchorus golden mosaic virus DNA-B Corchorus yellow spot virus DNA B Corey virus Corynebacterium phage P1201 Cotia virus SPAn232 Cotton leaf curl Gezira Cotton leaf curl Multan virus satellite U36-1 Cowpea chlorotic mottle virus RNA 3 Cowpea polerovirus Cowpea severe leaf curl-associated DNA beta Cowpox virus Croceibacter phage P2559Y Crocuta crocuta papillomavirus 1 Cronobacter phage Croton yellow vein mosaic alphasatellite Cryptophlebia leucotreta granulovirus Cucumber mottle virus Cucurbit aphid-borne yellows virus Cucurbit yellow mosaic alphasatellite Culex mononega-like virus 2 Culex nigripalpus NPV Curionopolis virus isolate BE AR 440009 Cyanophage Cycas necrotic stunt virus Cydia pomonella granulovirus Cynomolgus cytomegalovirus Cypovirus 14 RNA 5 Cyprinid herpesvirus Dahlia mosaic virus Deep-sea thermophilic phage D6E Deer papillomavirus Deerpox virus Delftia phage IME-DE1 Delftia phage RG-2014 Dendrolimus punctatus densovirus Desmodus rotundus polyomavirus 1 Diabrotica virgifera virgifera virus 2 Diachasmimorpha longicaudata rhabdovirus Diadromus pulchellus ascovirus 4a Dianke virus Diaphorina citri flavi-like virus Diatraea saccharalis granulovirus Dickeya phage RC-2014 Digitaria ciliaris striate mosaic virus Dishui lake phycodnavirus 1 Diuris virus A isolate SW3.3 Dragonfly larvae associated circular virus Dromedary stool-associated circular ssDNA virus Duck adenovirus Duck astrovirus C-NGB Dulcamara mottle virus Ecotropis obliqua NPV Ectocarpus siliculosus virus 1 Ectromelia virus Edwardsiella phage Eidolon helvum papillomavirus 3 Elephant endotheliotropic Elephantid herpesvirus 1 Emiliania huxleyi virus 86 Enhydra lutris papillomavirus 1 Enterobacteria phage Enterobacter phage Enterovirus goat Enterovirus SEV-gx Epinotia aporema granulovirus Epiphyas postvittana NPV Epizootic haematopoietic necrosis virus Equid herpesvirus Equine adenovirus Equus caballus papillomavirus 8 Equus ferus caballus papillomavirus Erinnyis ello granulovirus Erwinia phage Escherichia coli bacteriophage rv5 Escherichia phage Euproctis pseudoconspersa nucleopolyhedrovirus European hedgehog papillomavirus European sheatfish virus Faecal-associated gemycircularvirus 2 Falconid herpesvirus 1 Feldmannia species virus Felid herpesvirus 1 Feline infectious peritonitis virus Feline leukemia virus Felis catus gammaherpesvirus 1 Felis catus papillomavirus Fenneropenaeus chinensis hepatopancreatic densovirus Ferret papillomavirus isolate MpPV1 Fig fleck-associated virus Flamingopox virus FGPVKD09 Flavobacterium phage Foot-and-mouth disease virus Fowl adenovirus Fowlpox virus French bean leaf curl betasatellite-Kanpur French bean severe leaf curl virus Frog adenovirus 1 Frog virus 3 Fruit bat alphaherpesvirus 1 DNA Fur seal faeces associated circular DNA virus Fusarium graminearum deltaflexivirus 1 Fusarium poae dsRNA virus 2 Gallid herpesvirus Gallivirus Pf-CHK1 Gammapapillomavirus HPV127 Garlic virus B isolate Mesi 13 Gemycircularvirus SL1 Geobacillus virus E2 Giant guitarfish polyomavirus 1 Giant panda circovirus 1 Gill-associated virus Glossina pallidipes salivary gland hypertrophy virus Goatpox virus Pellor Golden Marseillevirus Gooseberry vein banding virus Gordonia phage Gossypium davidsonii symptomless Grapevine asteroid mosaic-associated virus Grapevine Bulgarian latent virus segment 1 Grapevine fleck virus Grapevine leafroll-associated virus Grapevine red blotch-associated virus Grapevine Red Globe virus Gremmeniella abietina mitochondrial RNA virus S2 Groundnut ringspot and Tomato chlorotic spot virus Gryllus bimaculatus nudivirus Guar leaf curl alphasatellite clone B81 A03 Haloarcula californiae icosahedral virus 1 Haloarcula hispanica icosahedral virus 2 Haloarcula phage SH1 Halocynthia phage JM-2012 Halorubrum phage HF2 Halorubrum pleomorphic virus 3 Halovirus HCTV Halovirus PH1 Hana virus Hardenbergia virus A Hedyotis uncinella yellow mosaic betasatellite Helicobacter phage KHP30 DNA Helicobasidium mompa endornavirus 1 Helicoverpa armigera Helicoverpa zea nudivirus Heliothis virescens ascovirus Hemileuca sp. nucleopolyhedrovirus Hepatitis C virus Hepatitis GB virus Hermit crab associated circular virus Hibiscus latent Fort Pierce virus Hibiscus latent Singapore virus Himetobi P virus Honeysuckle yellow vein mosaic virus Human adenovirus Human cosavirus Human fecal virus Human herpesvirus Human metapneumovirus Human papillomavirus Human plasma-associated gemycircularvirus Human polyomavirus Human T-lymphotropic virus Hydrangea ringspot virus Hyphantria cunea nucleopolyhedrovirusc13 Hyposoter fugitivus ichnovirus Ictalurid herpesvirus 1 Idiomarinaceae phage Phi1M2-2c15 Imjin River virus 1 Indian peanut clump virus Infectious spleen and kidney necrosis virus Invertebrate iridescent virus 6 c18 Iodobacteriophage phiPLPEc18 Jaagsiekte sheep retrovirusc18 Japanese eel endothelial cells-infecting virus Kalanchoe top-spotting virusc18 Kallithea virus isolate DrosEU46 Kharkiv 2014 Kaumoebavirus isolate Scc21 Kennedya yellow mosaic virus c21 Klebsiella phage 1513c22 Kluyvera phage Kvp1 Koolpinyah virus isolate DPP819 c26 Lactobacillus phage Lactococcus phage Lactococcus prophage Lake Sarah-associated circular virus-7 Lambdapapillomavirus 2 Lambdina fiscellaria nucleopolyhedrovirus Laodelphax striatella honeydew virus 1 Lasius neglectus virus 1 Lausannevirus Leek white stripe virus Leporid herpesvirus 4 isolate LHV4012612 Leptonychotes weddellii papillomavirus Lettuce chlorosis virus RNA2 Lettuce necrotic yellows virus Lettuce yellow mottle virus Leucania separata nuclear polyhedrosis virus Leucas zeylanica yellow vein virus satellite DNA Leuconostoc phage Limeum africanum associated virus isolate 2-12-F Linda virus Lindernia anagallis yellow vein virus Listeria phage Little cherry virus Lleida bat lyssavirus Ludwigia leaf distortion betasatellite Lumpy skin disease virus NI-2490 Lunk virus NKS-1 Lymantria dispar MNPV Lymantria xylina MNPV Lymphocystis disease virus Macaca fascicularis polyomavirus Macaca nemestrina herpesvirus 7 Macacine herpesvirus Macropodid herpesvirus 1 Magnaporthe oryzae chrysovirus Magpie-robin coronavirus HKU18 Maize Iranian mosaic nucleorhabdovirus Malakal virus Malvastrum yellow vein Mamastrovirus 2 Mamestra brassicae MNPV Mamestra configurata NPV Mannheimia phage Marbled eel polyomavirus Marseillevirus marseillevirus Maruca vitrata MNPV Mastomys coucha papillomavirus 2 Mastomys natalensis papillomavirus Maverick-related virus McMurdo Ice Shelf pond-associated Melanoplus sanguinipes entomopoxvirus Meleagrid herpesvirus 1 Melon aphid-borne yellows virus Merkel cell polyomavirus Merremia mosaic virus DNA B Mesorhizobium phagevB MloP Lo5R7ANS Mesta yellow vein mosaic virus Metallosphaera turreted icosahedral virus Methanothermobacter wolfeii prophage psiM100 Microcystis phage MaMV Micromonas sp. RCC1109 virus MpV1 Microplitis demolitor bracovirus Microviridae Fen7940 Microvirus CA82 Miniopterus africanus polyomavirus 1 Mocis latipes granulovirus Moku virus isolate Big Island Mollivirus sibericum isolate P1084-T Molluscum contagiosum virus subtype 1 Mongoose feces-associated gemycircularvirus c Monkeypox virus Zaire-96-I-16 Morelia viridis nidovirus Morganella phage vB MmoM Moroccan watermelon mosaic virus Mosquito dicistrovirus Mouse astrovirus Murid herpesvirus Murine adenovirus Murine herpesvirus Murine osteosarcoma virus Murine polyomavirus Murine roseolovirus isolate YOK1 Murine type C retrovirus Murmansk poxvirus Musca domestica salivary gland hypertrophy virus Mycobacteriophage Daenerys Mycobacteriophage Omnicron Mycobacterium phage Myrmica scabrinodis virus 1 Mythimna separata entomopoxvirus L Myxococcus phage Mx8 Myxoma virus Myzus persicae densovirus Nam Dinh virus Natrialba phage PhiCh1 Ndumu virus Neodiprion abietis NPV Neodiprion lecontei NPV Neodiprion sertifer NPV Nilaparvata lugens honeydew virus-2 Nile crocodilepox virus Niminivirus isolate NimiV Nipah virus Nitrincola phage 1M3-16 Nocardia phage NBR1 Noumeavirus isolate NMV1 Nudaurelia capensis beta virus NY 14 poxvirus Nyamanini virus Oat dwarf virus Odocoileus adenovirus 1 Oenococcus phage OkLCV satDNA 10 Okra leaf curl Okra mosaic virus Olive latent virus 3 Only Syngen Nebraska virus 5 Orf virus Orgyia leucostigma NPV Orgyia pseudotsugata MNPV Orpheovirus IHUMI-LCC2 genome assembly Oryctes rhinoceros virus Ostreid herpesvirus 1 Ostreococcus lucimarinus virus Ostreococcus mediterraneus virus 1 Ostreococcus tauri virus Otomops polyomavirus KY157 Ovine adenovirus 7 Ovine enzootic nasal tumour virus Ovine herpesvirus 2 Oyster mushroom spherical virus Pacmanvirus A23 genome assembly Paenibacillus phage Panine herpesvirus 2 Pantoea phage LIMEzero Pan troglodytes polyomavirus Papaya leaf curl Papaya ringspot virus Papiine herpesvirus 2 Papio ursinus cytomegalovirus isolate OCOM4-52 Parabacteroides phage YZ-2015a Paramecium bursaria Chlorella virus NY2A Parapoxvirus red deer-HL953 Parrot hepatitis B virus Passerivirus sp. Peach virus D isolate SK Peanut mottle virus Pectobacterium phage Pelagibacter phage Pelargonium zonate spot virus RNA 1 Penaeus monodon Penguinpox virus isolate PSan92 Penicillium aurantiogriseum totivirus 1 Pepper leaf curl Pepper vein yellows virus genomic RNA Peridroma alphabaculovirus isolate GR 167 Perigonia lusca single nucleopolyhedrovirus Phaeocystis globosa virus Phage phiJL001 Phage vB EcoP SU10 Phomopsis longicolla circular virus 1 Phormidium phage Phthorimaea operculella granulovirus Physalis mottle virus Pigeon adenovirus 2 Pigeonpox virus isolate FeP2 Piper yellow mottle virus Pithovirus sibericum Planaria asexual Planococcus citri densovirus Plantago asiatica mosaic virus Plodia interpunctella granulovirus Plutella xylostella granulovirus Po-Circo-like virus 21 Polaribacter phage Porcine adenovirus Porcine endogenous retrovirus E Porcine kobuvirus Porcine parainfluenza virus 1 Porcine parvovirus 6 Porcine stool-associated Potato virus Y Potato yellow dwarf virus Potato yellow mosaic Trinidad virus DNA B Powassan virus PreXMRV-1 provirus Prochlorococcus phage Procyon lotor papillomavirus 1 Pronghorn antelope pestivirus Propionibacterium phage Proteus phage vB PmiM Pm5461 Pseudaletia unipuncta granulovirus Pseudoalteromonas phage Pseudocowpox virus Pseudomonas phage Pseudoplusia includens SNPV IE Rabbit picornavirus Ranavirus maximus Rat cytomegalovirus Maastricht Rhesus monkey papillomavirus Rodent herpesvirus Peru Sibine fusca densovirus Sida yellow vein mosaic alphasatellite Simian virus 40 Sour cherry green ring mottle virus Sus scrofa papillomavirus type 1 Titi monkey adenovirus ECC-2011 Ursus maritimus papillomavirus 1 Wiseana iridescent virus WU Polyomavirus Zalophus californianus papillomavirus 1 Repeat Type Mono Di Tri Tetra Penta Hexa Compound

Virus Non-Genic Region

Primer Id Repeat Sequence Organism Name Abalone herpesvirus Abalone shriveling syndrome-associated virus Acanthocystis turfacea Chlorella virus 1 Achromobacter phage Acidianus filamentous virus 2 Acidianus tailed spindle virus Acidianus two-tailed virus Acinetobacter phage Aconitum latent virus Actinidia virus 1 Acyrthosiphon pisum bacteriophage Adoxophyes honmai Adoxophyes orana Aedes alboannulatus toti-like virus 1 Aedes taeniorhynchus iridescent virus Aeromonas phage African green monkey polyomavirus African swine fever virus Ageratum conyzoides symptomless alphasatellite Ageratum enation alphasatellite Ageratum leaf Cameroon betasatellite Ageratum leaf curl Ageratum yellow vein Aggregatibacter phage S1249 Agrotis ipsilon multiple nucleopolyhedrovirus Agrotis segetum Ailuropoda melanoleuca Alcelaphine herpesvirus Aleutian mink disease virus Alfalfa leaf curl virus Alternanthera yellow vein virus Alternaria longipes dsRNA virus 1 Ambystoma tigrinum virus Amsacta moorei entomopoxvirus Anabaena phage A-4L Anatid herpesvirus 1 Andrographis yellow vein leaf curl Anguillid herpesvirus 1 Anomala cuprea entomopoxvirus DNA Anopheles minimus irodovirus Antheraea pernyi nucleopolyhedrovirus Anticarsia gemmatalis Aotine herpesvirus Apocheima cinerarium nucleopolyhedrovirus Apple chlorotic leaf spot virus Arabis mosaic virus RNA 2 Aravan virus Archaeal BJ1 virus Arthrobacter phage Artichoke latent virus isolate FR37 Artogeia rapae granulovirus Asclepias asymptomatic virus Asparagus virus 3 Asterionellopsis glacialis RNA virus Astrovirus wild Ateline alphaherpesvirus 1 Atlantic salmon swim bladder sarcoma virus Aurantimonas phage AmM-1 DNA Aureococcus anophagefferens virus Australian bat lyssavirus Autographa californica nucleopolyhedrovirus Avian carcinoma virus Avian myelocytomatosis virus Avian paramyxovirus Avian sapelovirus Avon-Heathcote Estuary Azospirillum phage Cd Baboon endogenous virus Bacillariodnavirus LDMD-2013 Bacillus cereus bacteriophage Bacillus phage Bacteriophage Ball python nidovirus Banana mild mosaic virus Banana streak CA virus Banana streak virus Bank vole polyomavirus Barley stripe mosaic virus Bat adenovirus Bat circovirus isolate Acheng30 Bathycoccus sp. RCC1105 virus BpV1 Bat mastadenovirus Bat polyomavirus Bdellovibrio phage phi1422 Beak and feather disease virus BeAn 58058 virus Bean calico mosaic virus DNA B Bean leafroll virus Bean yellow disorder virus RNA 1 Beet necrotic yellow vein virus Beet virus Q RNA 1 Bitter gourd leaf curl disease-associated BK polyomavirus Blackberry virus E Black sea bass polyomavirus 1 Blueberry virus A Bombyx mori densovirus 3 Bombyx mori Macula-like virus Bombyx mori NPV Bordetella phage BPP-1 Bos taurus papillomavirus Bovine adenovirus Bovine ephemeral fever virus Bovine faeces associated circular DNA virus 2 Bovine herpesvirus Bovine papillomavirus Bovine papular stomatitis virus Brazilian marseillevirus Brevibacillus phage Sundance Broad bean mottle virus RNA 3 Brochothrix phage Brome mosaic virus Bromus catharticus striate mosaic virus Brugmansia suaveolens mottle virus Burkholderia cenocepacia phage BcepB1A Burkholderia cepacia phage Bcep22 Burkholderia phage Buzura suppressaria nucleopolyhedrovirus isolate Hubei Cacao swollen shoot virus Cafeteria roenbergensis virus BV-PW1 Callitrichine herpesvirus 3 Camelpox virus Camelus dromedarius papillomavirus type 1 Campoletis sonorensis ichnovirus Campylobacter phage Canarypox virus Candiru virus Canid herpesvirus Canine papillomavirus Canine parvovirus Canna yellow mottle-associated virus Capra hircus papillomavirus type 1 Caprine parainfluenza virus 3 Cardamine chlorotic fleck virus Cardioderma polyomavirus isolate KY336 Carollia perspicillata polyomavirus Carrot red leaf virus Carrot torradovirus 1RNA2 Cassava associated gemycircularvirus Cassia yellow blotch virus RNA3 Catopsilia pomona nucleopolyhedrovirus Caulobacter phage Cavally virus Caviid herpesvirus Cebus albifrons polyomavirus 1 Cedratvirus A11 Cellulophaga phage Ceratocystis polonica partitivirus Cercopithecine herpesvirus Cereal yellow dwarf virus Cervid adenovirus 1 Chaerephon polyomavirus 1 Chaetoceros socialis f. radians RNA virus Chaetoceros tenuissimus DNA virus Chequa iflavirus Cherry virus A Chicken anemia virus Chicken astrovirus Chicken gallivirus 1 Chicken orivirus 1 Chicken sicinivirus JSY Chickpea chlorosis Australia virus Chikungunya virus Chili leaf curl Bhatinda betasatellite Chilli leaf curl disease associated Chilli leaf curl Multan alphasatellite Chilli veinal mottle virus Chimpanzee adenovirus Y25 Chimpanzee alpha-1 herpesvirus Chimpanzee faeces associated microphage 1 Chlorocebus pygerythrus polyomavirus 3 Choristoneura biennis entomopoxvirus L Choristoneura fumiferana Choristoneura rosaceana Chrysochromulina ericina virus Chrysodeixis chalcites nucleopolyhedrovirus Circoviridae Circovirus-like genome Citrobacter phage Citrus endogenous pararetrovirus Citrus leaf blotch virus Citrus tristeza virus Clanis bilineata nucleopolyhedrosis virus Classical swine fever virus Cleome leaf crumple virus associated DNA 1 Clerodendrum golden mosaic Clostera anachoreta granulovirus Clostera anastomosis granulovirus Henan Clostridium phage c-st Clostridium phage phiCD111 Clover yellow vein virus Cnaphalocrocis medinalis granulovirus Colobus guereza papillomavirus type 2 Colombian potato soil-borne virus RNA 2 Columbid alphaherpesvirus 1 Colwellia phage 9A Common bottlenose dolphin gammaherpesvirus 1 Common vole polyomavirus Condylorrhiza vestigialis MNPV Corchorus golden mosaic virus DNA-B Corchorus yellow spot virus DNA B Corey virus Corynebacterium phage P1201 Cotia virus SPAn232 Cotton leaf curl Gezira Cotton leaf curl Multan virus satellite U36-1 Cowpea chlorotic mottle virus RNA 3 Cowpea polerovirus Cowpea severe leaf curl-associated DNA beta Cowpox virus Croceibacter phage P2559Y Crocuta crocuta papillomavirus 1 Cronobacter phage Croton yellow vein mosaic alphasatellite Cryptophlebia leucotreta granulovirus Cucumber mottle virus Cucurbit aphid-borne yellows virus Cucurbit yellow mosaic alphasatellite Culex mononega-like virus 2 Culex nigripalpus NPV Curionopolis virus isolate BE AR 440009 Cyanophage Cycas necrotic stunt virus Cydia pomonella granulovirus Cynomolgus cytomegalovirus Cypovirus 14 RNA 5 Cyprinid herpesvirus Dahlia mosaic virus Deep-sea thermophilic phage D6E Deer papillomavirus Deerpox virus Delftia phage IME-DE1 Delftia phage RG-2014 Dendrolimus punctatus densovirus Desmodus rotundus polyomavirus 1 Diabrotica virgifera virgifera virus 2 Diachasmimorpha longicaudata rhabdovirus Diadromus pulchellus ascovirus 4a Dianke virus Diaphorina citri flavi-like virus Diatraea saccharalis granulovirus Dickeya phage RC-2014 Digitaria ciliaris striate mosaic virus Dishui lake phycodnavirus 1 Diuris virus A isolate SW3.3 Dragonfly larvae associated circular virus Dromedary stool-associated circular ssDNA virus Duck adenovirus Duck astrovirus C-NGB Dulcamara mottle virus Ecotropis obliqua NPV Ectocarpus siliculosus virus 1 Ectromelia virus Edwardsiella phage Eidolon helvum papillomavirus 3 Elephant endotheliotropic Elephantid herpesvirus 1 Emiliania huxleyi virus 86 Enhydra lutris papillomavirus 1 Enterobacteria phage Enterobacter phage Enterovirus goat Enterovirus SEV-gx Epinotia aporema granulovirus Epiphyas postvittana NPV Epizootic haematopoietic necrosis virus Equid herpesvirus Equine adenovirus Equus caballus papillomavirus 8 Equus ferus caballus papillomavirus Erinnyis ello granulovirus Erwinia phage Escherichia coli bacteriophage rv5 Escherichia phage Euproctis pseudoconspersa nucleopolyhedrovirus European hedgehog papillomavirus European sheatfish virus Faecal-associated gemycircularvirus 2 Falconid herpesvirus 1 Feldmannia species virus Felid herpesvirus 1 Feline infectious peritonitis virus Feline leukemia virus Felis catus gammaherpesvirus 1 Felis catus papillomavirus Fenneropenaeus chinensis hepatopancreatic densovirus Ferret papillomavirus isolate MpPV1 Fig fleck-associated virus Flamingopox virus FGPVKD09 Flavobacterium phage Foot-and-mouth disease virus Fowl adenovirus Fowlpox virus French bean leaf curl betasatellite-Kanpur French bean severe leaf curl virus Frog adenovirus 1 Frog virus 3 Fruit bat alphaherpesvirus 1 DNA Fur seal faeces associated circular DNA virus Fusarium graminearum deltaflexivirus 1 Fusarium poae dsRNA virus 2 Gallid herpesvirus Gallivirus Pf-CHK1 Gammapapillomavirus HPV127 Garlic virus B isolate Mesi 13 Gemycircularvirus SL1 Geobacillus virus E2 Giant guitarfish polyomavirus 1 Giant panda circovirus 1 Gill-associated virus Glossina pallidipes salivary gland hypertrophy virus Goatpox virus Pellor Golden Marseillevirus Gooseberry vein banding virus Gordonia phage Gossypium davidsonii symptomless Grapevine asteroid mosaic-associated virus Grapevine Bulgarian latent virus segment 1 Grapevine fleck virus Grapevine leafroll-associated virus Grapevine red blotch-associated virus Grapevine Red Globe virus Gremmeniella abietina mitochondrial RNA virus S2 Groundnut ringspot and Tomato chlorotic spot virus Gryllus bimaculatus nudivirus Guar leaf curl alphasatellite clone B81 A03 Haloarcula californiae icosahedral virus 1 Haloarcula hispanica icosahedral virus 2 Haloarcula phage SH1 Halocynthia phage JM-2012 Halorubrum phage HF2 Halorubrum pleomorphic virus 3 Halovirus HCTV Halovirus PH1 Hana virus Hardenbergia virus A Hedyotis uncinella yellow mosaic betasatellite Helicobacter phage KHP30 DNA Helicobasidium mompa endornavirus 1 Helicoverpa armigera Helicoverpa zea nudivirus Heliothis virescens ascovirus Hemileuca sp. nucleopolyhedrovirus Hepatitis C virus Hepatitis GB virus Hermit crab associated circular virus Hibiscus latent Fort Pierce virus Hibiscus latent Singapore virus Himetobi P virus Honeysuckle yellow vein mosaic virus Human adenovirus Human cosavirus Human fecal virus Human herpesvirus Human metapneumovirus Human papillomavirus Human plasma-associated gemycircularvirus Human polyomavirus Human T-lymphotropic virus Hydrangea ringspot virus Hyphantria cunea nucleopolyhedrovirusc13 Hyposoter fugitivus ichnovirus Ictalurid herpesvirus 1 Idiomarinaceae phage Phi1M2-2c15 Imjin River virus 1 Indian peanut clump virus Infectious spleen and kidney necrosis virus Invertebrate iridescent virus 6 c18 Iodobacteriophage phiPLPEc18 Jaagsiekte sheep retrovirusc18 Japanese eel endothelial cells-infecting virus Kalanchoe top-spotting virusc18 Kallithea virus isolate DrosEU46 Kharkiv 2014 Kaumoebavirus isolate Scc21 Kennedya yellow mosaic virus c21 Klebsiella phage 1513c22 Kluyvera phage Kvp1 Koolpinyah virus isolate DPP819 c26 Lactobacillus phage Lactococcus phage Lactococcus prophage Lake Sarah-associated circular virus-7 Lambdapapillomavirus 2 Lambdina fiscellaria nucleopolyhedrovirus Laodelphax striatella honeydew virus 1 Lasius neglectus virus 1 Lausannevirus Leek white stripe virus Leporid herpesvirus 4 isolate LHV4012612 Leptonychotes weddellii papillomavirus Lettuce chlorosis virus RNA2 Lettuce necrotic yellows virus Lettuce yellow mottle virus Leucania separata nuclear polyhedrosis virus Leucas zeylanica yellow vein virus satellite DNA Leuconostoc phage Limeum africanum associated virus isolate 2-12-F Linda virus Lindernia anagallis yellow vein virus Listeria phage Little cherry virus Lleida bat lyssavirus Ludwigia leaf distortion betasatellite Lumpy skin disease virus NI-2490 Lunk virus NKS-1 Lymantria dispar MNPV Lymantria xylina MNPV Lymphocystis disease virus Macaca fascicularis polyomavirus Macaca nemestrina herpesvirus 7 Macacine herpesvirus Macropodid herpesvirus 1 Magnaporthe oryzae chrysovirus Magpie-robin coronavirus HKU18 Maize Iranian mosaic nucleorhabdovirus Malakal virus Malvastrum yellow vein Mamastrovirus 2 Mamestra brassicae MNPV Mamestra configurata NPV Mannheimia phage Marbled eel polyomavirus Marseillevirus marseillevirus Maruca vitrata MNPV Mastomys coucha papillomavirus 2 Mastomys natalensis papillomavirus Maverick-related virus McMurdo Ice Shelf pond-associated Melanoplus sanguinipes entomopoxvirus Meleagrid herpesvirus 1 Melon aphid-borne yellows virus Merkel cell polyomavirus Merremia mosaic virus DNA B Mesorhizobium phagevB MloP Lo5R7ANS Mesta yellow vein mosaic virus Metallosphaera turreted icosahedral virus Methanothermobacter wolfeii prophage psiM100 Microcystis phage MaMV Micromonas sp. RCC1109 virus MpV1 Microplitis demolitor bracovirus Microviridae Fen7940 Microvirus CA82 Miniopterus africanus polyomavirus 1 Mocis latipes granulovirus Moku virus isolate Big Island Mollivirus sibericum isolate P1084-T Molluscum contagiosum virus subtype 1 Mongoose feces-associated gemycircularvirus c Monkeypox virus Zaire-96-I-16 Morelia viridis nidovirus Morganella phage vB MmoM Moroccan watermelon mosaic virus Mosquito dicistrovirus Mouse astrovirus Murid herpesvirus Murine adenovirus Murine herpesvirus Murine osteosarcoma virus Murine polyomavirus Murine roseolovirus isolate YOK1 Murine type C retrovirus Murmansk poxvirus Musca domestica salivary gland hypertrophy virus Mycobacteriophage Daenerys Mycobacteriophage Omnicron Mycobacterium phage Myrmica scabrinodis virus 1 Mythimna separata entomopoxvirus L Myxococcus phage Mx8 Myxoma virus Myzus persicae densovirus Nam Dinh virus Natrialba phage PhiCh1 Ndumu virus Neodiprion abietis NPV Neodiprion lecontei NPV Neodiprion sertifer NPV Nilaparvata lugens honeydew virus-2 Nile crocodilepox virus Niminivirus isolate NimiV Nipah virus Nitrincola phage 1M3-16 Nocardia phage NBR1 Noumeavirus isolate NMV1 Nudaurelia capensis beta virus NY 14 poxvirus Nyamanini virus Oat dwarf virus Odocoileus adenovirus 1 Oenococcus phage OkLCV satDNA 10 Okra leaf curl Okra mosaic virus Olive latent virus 3 Only Syngen Nebraska virus 5 Orf virus Orgyia leucostigma NPV Orgyia pseudotsugata MNPV Orpheovirus IHUMI-LCC2 genome assembly Oryctes rhinoceros virus Ostreid herpesvirus 1 Ostreococcus lucimarinus virus Ostreococcus mediterraneus virus 1 Ostreococcus tauri virus Otomops polyomavirus KY157 Ovine adenovirus 7 Ovine enzootic nasal tumour virus Ovine herpesvirus 2 Oyster mushroom spherical virus Pacmanvirus A23 genome assembly Paenibacillus phage Panine herpesvirus 2 Pantoea phage LIMEzero Pan troglodytes polyomavirus Papaya leaf curl Papaya ringspot virus Papiine herpesvirus 2 Papio ursinus cytomegalovirus isolate OCOM4-52 Parabacteroides phage YZ-2015a Paramecium bursaria Chlorella virus NY2A Parapoxvirus red deer-HL953 Parrot hepatitis B virus Passerivirus sp. Peach virus D isolate SK Peanut mottle virus Pectobacterium phage Pelagibacter phage Pelargonium zonate spot virus RNA 1 Penaeus monodon Penguinpox virus isolate PSan92 Penicillium aurantiogriseum totivirus 1 Pepper leaf curl Pepper vein yellows virus genomic RNA Peridroma alphabaculovirus isolate GR 167 Perigonia lusca single nucleopolyhedrovirus Phaeocystis globosa virus Phage phiJL001 Phage vB EcoP SU10 Phomopsis longicolla circular virus 1 Phormidium phage Phthorimaea operculella granulovirus Physalis mottle virus Pigeon adenovirus 2 Pigeonpox virus isolate FeP2 Piper yellow mottle virus Pithovirus sibericum Planaria asexual Planococcus citri densovirus Plantago asiatica mosaic virus Plodia interpunctella granulovirus Plutella xylostella granulovirus Po-Circo-like virus 21 Polaribacter phage Porcine adenovirus Porcine endogenous retrovirus E Porcine kobuvirus Porcine parainfluenza virus 1 Porcine parvovirus 6 Porcine stool-associated Potato virus Y Potato yellow dwarf virus Potato yellow mosaic Trinidad virus DNA B Powassan virus PreXMRV-1 provirus Prochlorococcus phage Procyon lotor papillomavirus 1 Pronghorn antelope pestivirus Propionibacterium phage Proteus phage vB PmiM Pm5461 Pseudaletia unipuncta granulovirus Pseudoalteromonas phage Pseudocowpox virus Pseudomonas phage Pseudoplusia includens SNPV IE Rabbit picornavirus Ranavirus maximus Rat cytomegalovirus Maastricht Rhesus monkey papillomavirus Rodent herpesvirus Peru Sibine fusca densovirus Sida yellow vein mosaic alphasatellite Simian virus 40 Sour cherry green ring mottle virus Sus scrofa papillomavirus type 1 Titi monkey adenovirus ECC-2011 Ursus maritimus papillomavirus 1 Wiseana iridescent virus WU Polyomavirus Zalophus californianus papillomavirus 1 Repeat Type Mono Di Tri Tetra Penta Hexa Compound

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Fungi

Fungi Genic Region

Repeat Sequence Gene symbol or Locus tag Organism Name Ajellomyces dermatitidis Amorphotheca resinae Anthracocystis flocculosa Arthrobotrys oligospora Arthroderma otae Ascoidea rubescens Aspergillus aculeatus Aspergillus bombycis Aspergillus campestris Aspergillus candidus Aspergillus clavatus Aspergillus fischeri Aspergillus flavus Aspergillus fumigatus Aspergillus glaucus Aspergillus nidulans Aspergillus niger Aspergillus nomius Aspergillus novofumigatus Aspergillus oryzae Aspergillus steynii Aspergillus terreus Aureobasidium namibiae Aureobasidium subglaciale Babjeviella inositovora Batrachochytrium dendrobatidis Baudoinia panamericana Beauveria bassiana Bipolaris maydis Bipolaris oryzae Bipolaris sorokiniana Bipolaris victoriae Bipolaris zeicola Botrytis cinerea Candida albicans Candida dubliniensis Candida orthopsilosis Candida tanzawaensis Candida tropicalis Capronia coronata Capronia epimyces Cercospora beticola Chaetomium globosum Chaetomium thermophilum Cladophialophora carrionii Cladophialophora immunda Cladophialophora psammophila Cladophialophora yegresii Clavispora lusitaniae Coccidioides immitis Coccidioides posadasii Colletotrichum graminicola Colletotrichum higginsianum Colletotrichum orchidophilum Coniophora puteana Coniosporium apollinis Coprinopsis cinerea Cordyceps fumosorosea Cordyceps militaris Cryptococcus amylolentus Cryptococcus gattii Cryptococcus neoformans Cutaneotrichosporon oleaginosus Cyberlindnera jadinii Cyphellophora europaea Debaryomyces fabryi Debaryomyces hansenii Dichomitus squalens Diplodia corticola Encephalitozoon cuniculi Encephalitozoon hellem Encephalitozoon intestinalis Encephalitozoon romaleae Endocarpon pusillum Eremothecium cymbalariae Eremothecium gossypii Eremothecium sinecaudum Exophiala aquamarina Exophiala dermatitidis Exophiala mesophila Exophiala oligosperma Exophiala spinifera Exophiala xenobiotica Fibroporia radiculosa Fomitiporia mediterranea Fonsecaea erecta Fonsecaea monophora Fonsecaea multimorphosa Fonsecaea nubica Fonsecaea pedrosoi Fusarium fujikuroi Fusarium graminearum Fusarium oxysporum Fusarium pseudograminearum Fusarium verticillioides Gaeumannomyces tritici Glarea lozoyensis Gloeophyllum trabeum Grosmannia clavigera Heterobasidion irregulare Histoplasma capsulatum Hyphopichia burtonii Kalmanozyma brasiliensis Kazachstania africana Kazachstania naganishii Kluyveromyces lactis Kluyveromyces marxianus Kockovaella imperatae Komagataella phaffii Kuraishia capsulata Kwoniella bestiolae Kwoniella dejecticola Kwoniella mangroviensis Kwoniella pini Laccaria bicolor Lachancea lanzarotensis Lachancea thermotolerans Leptosphaeria maculans Lobosporangium transversale Magnaporthe oryzae Malassezia globosa Malassezia pachydermatis Malassezia sympodialis Marssonina brunnea Melampsora larici-populina Meliniomyces bicolor Metarhizium acridum Metarhizium brunneum Metarhizium robertsii Metschnikowia bicuspidata Meyerozyma guilliermondii Mitosporidium daphniae Mixia osmundae Moesziomyces antarcticus Nannizzia gypsea Naumovozyma castellii Naumovozyma dairenensis Nematocida parisii Neurospora crassa Neurospora tetrasperma Nosema ceranae Ogataea parapolymorpha Ogataea polymorpha Ordospora colligata Paracoccidioides brasiliensis Paracoccidioides lutzii Paraphaeosphaeria sporulosa Parastagonospora nodorum Penicilliopsis zonata Penicillium arizonense Penicillium chrysogenum Penicillium digitatum Penicillium expansum Penicillium marneffei Pestalotiopsis fici Phaeoacremonium minimum Phanerochaete carnosa Phialocephala scopiformis Phialophora attae Phycomyces blakesleeanus Pichia kudriavzevii Pichia membranifaciens Pneumocystis carinii Pneumocystis jirovecii Pneumocystis murina Pochonia chlamydosporia Podospora anserina Postia placenta Pseudocercospora fijiensis Pseudogymnoascus destructans Pseudogymnoascus verrucosus Pseudozyma hubeiensis Puccinia graminis Punctularia strigosozonata Purpureocillium lilacinum Pyrenophora tritici-repentis Ramularia collo-cygni Rasamsonia emersonii Rhinocladiella mackenziei Rhizopus microsporus Rhodotorula graminis Rhodotorula toruloides Saccharomyces cerevisiae Saccharomyces eubayanus Saitoella complicata Scedosporium apiospermum Scheffersomyces stipitis Schizophyllum commune Schizosaccharomyces cryophilus Schizosaccharomyces japonicus Schizosaccharomyces octosporus Schizosaccharomyces pombe Sclerotinia sclerotiorum Serpula lacrymans Setosphaeria turcica sorbophila strain Sordaria macrospora Spathaspora passalidarum Sphaerulina musiva Spizellomyces punctatus Sporothrix schenckii Stereum hirsutum Sugiyamaella lignohabitans Talaromyces atroroseus Talaromyces stipitatus Tetrapisispora blattae Tetrapisispora phaffii Thermothelomyces thermophila Thielavia terrestris Tilletiaria anomala Torulaspora delbrueckii Trametes versicolor Tremella mesenterica Trichoderma asperellum Trichoderma atroviride Trichoderma citrinoviride Trichoderma gamsii Trichoderma harzianum Trichoderma reesei Trichoderma virens Trichophyton benhamiae Trichophyton rubrum Trichophyton verrucosum Trichosporon asahii Tsuchiyaea wingfieldii Tuber melanosporum Uncinocarpus reesii Ustilago maydis Vanderwaltozyma polyspora Vavraia culicis Verruconis gallopava Verticillium alfalfae Verticillium dahliae Vittaforma corneae Wallemia ichthyophaga Wallemia mellicola Wickerhamomyces anomalus Wickerhamomyces ciferrii Xylona heveae Yarrowia lipolytica Zygosaccharomyces rouxii Repeat Type Mono Di Tri Tetra Penta Hexa Compound

Fungi Non-Genic Region

Primer Id Repeat Sequence Organism Name Ajellomyces dermatitidis Amorphotheca resinae Anthracocystis flocculosa Arthrobotrys oligospora Arthroderma otae Ascoidea rubescens Aspergillus aculeatus Aspergillus bombycis Aspergillus campestris Aspergillus candidus Aspergillus clavatus Aspergillus fischeri Aspergillus flavus Aspergillus fumigatus Aspergillus glaucus Aspergillus nidulans Aspergillus niger Aspergillus nomius Aspergillus novofumigatus Aspergillus oryzae Aspergillus steynii Aspergillus terreus Aureobasidium namibiae Aureobasidium subglaciale Babjeviella inositovora Batrachochytrium dendrobatidis Baudoinia panamericana Beauveria bassiana Bipolaris maydis Bipolaris oryzae Bipolaris sorokiniana Bipolaris victoriae Bipolaris zeicola Botrytis cinerea Candida albicans Candida dubliniensis Candida orthopsilosis Candida tanzawaensis Candida tropicalis Capronia coronata Capronia epimyces Cercospora beticola Chaetomium globosum Chaetomium thermophilum Cladophialophora carrionii Cladophialophora immunda Cladophialophora psammophila Cladophialophora yegresii Clavispora lusitaniae Coccidioides immitis Coccidioides posadasii Colletotrichum graminicola Colletotrichum higginsianum Colletotrichum orchidophilum Coniophora puteana Coniosporium apollinis Coprinopsis cinerea Cordyceps fumosorosea Cordyceps militaris Cryptococcus amylolentus Cryptococcus gattii Cryptococcus neoformans Cutaneotrichosporon oleaginosus Cyberlindnera jadinii Cyphellophora europaea Debaryomyces fabryi Debaryomyces hansenii Dichomitus squalens Diplodia corticola Encephalitozoon cuniculi Encephalitozoon hellem Encephalitozoon intestinalis Encephalitozoon romaleae Endocarpon pusillum Eremothecium cymbalariae Eremothecium gossypii Eremothecium sinecaudum Exophiala aquamarina Exophiala dermatitidis Exophiala mesophila Exophiala oligosperma Exophiala spinifera Exophiala xenobiotica Fibroporia radiculosa Fomitiporia mediterranea Fonsecaea erecta Fonsecaea monophora Fonsecaea multimorphosa Fonsecaea nubica Fonsecaea pedrosoi Fusarium fujikuroi Fusarium graminearum Fusarium oxysporum Fusarium pseudograminearum Fusarium verticillioides Gaeumannomyces tritici Glarea lozoyensis Gloeophyllum trabeum Grosmannia clavigera Heterobasidion irregulare Histoplasma capsulatum Hyphopichia burtonii Kalmanozyma brasiliensis Kazachstania africana Kazachstania naganishii Kluyveromyces lactis Kluyveromyces marxianus Kockovaella imperatae Komagataella phaffii Kuraishia capsulata Kwoniella bestiolae Kwoniella dejecticola Kwoniella mangroviensis Kwoniella pini Laccaria bicolor Lachancea lanzarotensis Lachancea thermotolerans Leptosphaeria maculans Lobosporangium transversale Magnaporthe oryzae Malassezia globosa Malassezia pachydermatis Malassezia sympodialis Marssonina brunnea Melampsora larici-populina Meliniomyces bicolor Metarhizium acridum Metarhizium brunneum Metarhizium robertsii Metschnikowia bicuspidata Meyerozyma guilliermondii Mitosporidium daphniae Mixia osmundae Moesziomyces antarcticus Nannizzia gypsea Naumovozyma castellii Naumovozyma dairenensis Nematocida parisii Neurospora crassa Neurospora tetrasperma Nosema ceranae Ogataea parapolymorpha Ogataea polymorpha Ordospora colligata Paracoccidioides brasiliensis Paracoccidioides lutzii Paraphaeosphaeria sporulosa Parastagonospora nodorum Penicilliopsis zonata Penicillium arizonense Penicillium chrysogenum Penicillium digitatum Penicillium expansum Penicillium marneffei Pestalotiopsis fici Phaeoacremonium minimum Phanerochaete carnosa Phialocephala scopiformis Phialophora attae Phycomyces blakesleeanus Pichia kudriavzevii Pichia membranifaciens Pneumocystis carinii Pneumocystis jirovecii Pneumocystis murina Pochonia chlamydosporia Podospora anserina Postia placenta Pseudocercospora fijiensis Pseudogymnoascus destructans Pseudogymnoascus verrucosus Pseudozyma hubeiensis Puccinia graminis Punctularia strigosozonata Purpureocillium lilacinum Pyrenophora tritici-repentis Ramularia collo-cygni Rasamsonia emersonii Rhinocladiella mackenziei Rhizopus microsporus Rhodotorula graminis Rhodotorula toruloides Saccharomyces cerevisiae Saccharomyces eubayanus Saitoella complicata Scedosporium apiospermum Scheffersomyces stipitis Schizophyllum commune Schizosaccharomyces cryophilus Schizosaccharomyces japonicus Schizosaccharomyces octosporus Schizosaccharomyces pombe Sclerotinia sclerotiorum Serpula lacrymans Setosphaeria turcica sorbophila strain Sordaria macrospora Spathaspora passalidarum Sphaerulina musiva Spizellomyces punctatus Sporothrix schenckii Stereum hirsutum Sugiyamaella lignohabitans Talaromyces atroroseus Talaromyces stipitatus Tetrapisispora blattae Tetrapisispora phaffii Thermothelomyces thermophila Thielavia terrestris Tilletiaria anomala Torulaspora delbrueckii Trametes versicolor Tremella mesenterica Trichoderma asperellum Trichoderma atroviride Trichoderma citrinoviride Trichoderma gamsii Trichoderma harzianum Trichoderma reesei Trichoderma virens Trichophyton benhamiae Trichophyton rubrum Trichophyton verrucosum Trichosporon asahii Tsuchiyaea wingfieldii Tuber melanosporum Uncinocarpus reesii Ustilago maydis Vanderwaltozyma polyspora Vavraia culicis Verruconis gallopava Verticillium alfalfae Verticillium dahliae Vittaforma corneae Wallemia ichthyophaga Wallemia mellicola Wickerhamomyces anomalus Wickerhamomyces ciferrii Xylona heveae Yarrowia lipolytica Zygosaccharomyces rouxii Repeat Type Mono Di Tri Tetra Penta Hexa Compound

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Protozoa

Protozoa Genic Region

Repeat Sequence Gene symbol or Locus tag Organism Name Acanthamoeba castellanii Acytostelium subglobosum aegleria gruberi annochloropsis gaditana Aphanomyces astaci Aphanomyces invadans Aureococcus anophagefferens Babesia bigemina Babesia bovis Babesia equi Babesia microti Bigelowiella natans Blastocystis hominis, Blastocystis sp. Cryptomonas paramecium Cryptosporidium hominis Cryptosporidium muris Cryptosporidium parvum Cyclospora cayetanensis Dictyostelium discoideum Dictyostelium fasciculatum Dictyostelium purpureum Eimeria acervulina Eimeria maxima Eimeria mitis Eimeria necatrix Eimeria tenella Emiliania huxleyi Entamoeba dispar Entamoeba histolytica Entamoeba invadens Entamoeba nuttalli Giardia lamblia Gregarina niphandrodes Guillardia theta Hammondia hammondi Hemiselmis andersenii Leishmania braziliensis Leishmania donovani Leishmania infantum Leishmania major Leishmania mexicana Leishmania panamensis Leptomonas pyrrhocoris Paramecium tetraurelia Perkinsus marinus Phaeodactylum tricornutum Phytophthora infestans Phytophthora parasitica Phytophthora sojae Plasmodium berghei Plasmodium chabaudi Plasmodium coatneyi Plasmodium cynomolgi Plasmodium falciparum Plasmodium fragile Plasmodium gaboni Plasmodium inui Plasmodium knowlesi Plasmodium reichenowi Plasmodium vinckei Plasmodium vivax Plasmodium yoelii Plasmopara halstedii Polysphondylium pallidum Saprolegnia diclina Saprolegnia parasitica Tetrahymena thermophila Thalassiosira pseudonana Thecamonas trahens Theileria annulata Theileria orientalis Theileria parva Toxoplasma gondii Trichomonas vaginalis Trypanosoma brucei Trypanosoma cruzi Trypanosoma grayi Repeat Type Mono Di Tri Tetra Penta Hexa Compound

Protozoa Non-Genic Region

Primer Id Repeat Sequence Organism Name Acanthamoeba castellanii Acytostelium subglobosum aegleria gruberi annochloropsis gaditana Aphanomyces astaci Aphanomyces invadans Aureococcus anophagefferens Babesia bigemina Babesia bovis Babesia equi Babesia microti Bigelowiella natans Blastocystis hominis, Blastocystis sp. Cryptomonas paramecium Cryptosporidium hominis Cryptosporidium muris Cryptosporidium parvum Cyclospora cayetanensis Dictyostelium discoideum Dictyostelium fasciculatum Dictyostelium purpureum Eimeria acervulina Eimeria maxima Eimeria mitis Eimeria necatrix Eimeria tenella Emiliania huxleyi Entamoeba dispar Entamoeba histolytica Entamoeba invadens Entamoeba nuttalli Giardia lamblia Gregarina niphandrodes Guillardia theta Hammondia hammondi Hemiselmis andersenii Leishmania braziliensis Leishmania donovani Leishmania infantum Leishmania major Leishmania mexicana Leishmania panamensis Leptomonas pyrrhocoris Paramecium tetraurelia Perkinsus marinus Phaeodactylum tricornutum Phytophthora infestans Phytophthora parasitica Phytophthora sojae Plasmodium berghei Plasmodium chabaudi Plasmodium coatneyi Plasmodium cynomolgi Plasmodium falciparum Plasmodium fragile Plasmodium gaboni Plasmodium inui Plasmodium knowlesi Plasmodium reichenowi Plasmodium vinckei Plasmodium vivax Plasmodium yoelii Plasmopara halstedii Polysphondylium pallidum Saprolegnia diclina Saprolegnia parasitica Tetrahymena thermophila Thalassiosira pseudonana Thecamonas trahens Theileria annulata Theileria orientalis Theileria parva Toxoplasma gondii Trichomonas vaginalis Trypanosoma brucei Trypanosoma cruzi Trypanosoma grayi Repeat Type Mono Di Tri Tetra Penta Hexa Compound