SSRome Genomic Database

Plant Genic Region

Search instructions:

* Please enter your interested "SSR Repeat Sequence" (e.g. (AGA)6 ) in the Repeat Sequence field "Optional".

* Please enter your interested "Gene symbol or Locus tag" (e.g. SOS4 or LOC109707634) in Gene symbol or Locus tag field "Optional".

* Please select "Organism Name" from Organism Name drop-down menu "required".

* Please select "Repeat Type" from Repeat Type drop-down menu "required".

* Customize all options, then press "Search" button to get your results.

Repeat Sequence Gene symbol or Locus tag Organism Name Phoenix dactylifera Arabidopsis thaliana Aegilops tauschii Amborella trichopoda Ananas comosus Arabidopsis lyrata Arachis duranensis Arachis ipaensis Asparagus officinalis Auxenochlorella protothecoides Bathycoccus prasinos Beta vulgaris Brachypodium distachyon Brassica napus Brassica oleracea Brassica rapa Cajanus cajan Camelina sativa Capsella rubella Capsicum annuum Carica papaya Chenopodium quinoa Chlamydomonas reinhardtii Chlorella variabilis Chondrus crispus Cicer arietinum Citrus clementina Citrus sinensis Coccomyxa subellipsoidae Cucumis melo Cucumis sativus Cucurbita maxima Cucurbita moschata Cucurbita pepo Cyanidioschyzon merolae Daucus carota Dendrobium catenatum Durio zibethinus Elaeis guineensis Erythranthe guttata Eucalyptus grandis Eutrema salsugineum Fragaria vesca Galdieria sulphuraria Glycine max Gossypium hirsutum Gossypium raimondii Herrania umbratica Hevea brasiliensis Ipomoea nil Jatropha curcas Juglans regia Lactuca sativa Lupinus angustifolius Malus domestica Manihot esculenta Medicago truncatula Micromonas pusilla Momordica charantia Monoraphidium neglectum Morus notabilis Musa acuminata Nelumbo nucifera Nicotiana sylvestris Nicotiana tomentosiformis Olea europaea Oryza brachyantha Oryza sativa Japonica Ostreococcus lucimarinus Ostreococcus tauri Phalaenopsis equestris Phaseolus vulgaris Physcomitrella patens Populus euphratica Populus trichocarpa Prunus avium Prunus mume Prunus persica Pyrus x bretschneideri Quercus suber Raphanus sativus Ricinus communis Rosa chinensis Selaginella moellendorffii Sesamum indicum Setaria italica Solanum lycopersicum Solanum pennellii Solanum tuberosum Sorghum bicolor Spinacia oleracea Tarenaya hassleriana Theobroma cacao Vigna angularis Vigna radiata Vitis vinifera Volvox carteri Zea mays Ziziphus jujuba Repeat Type Mono Di Tri Tetra Penta Hexa Compound

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Plant Non-genic Region

Search instructions:

* Please enter your interested "SSRome Primer ID" (e.g. VigSSR_8) in the Primer ID field "Optional".

* Please enter your interested "SSR Repeat Sequence" (e.g. (TG)6 ) in the Repeat Sequence field "Optional".

* Please select "Organism Name" from Organism Name drop-down menu "required".

* Please select "Repeat Type" from Repeat Type drop-down menu "required".

* Customize all options, then press "Search" button to get your results.

Primer ID Repeat Sequence Organism Name Phoenix dactylifera Arabidopsis thaliana Aegilops tauschii Amborella trichopoda Ananas comosus Arabidopsis lyrata Arachis duranensis Arachis ipaensis Asparagus officinalis Auxenochlorella protothecoides Bathycoccus prasinos Beta vulgaris Brachypodium distachyon Brassica napus Brassica oleracea Brassica rapa Cajanus cajan Camelina sativa Capsella rubella Capsicum annuum Carica papaya Chenopodium quinoa Chlamydomonas reinhardtii Chlorella variabilis Chondrus crispus Cicer arietinum Citrus clementina Citrus sinensis Coccomyxa subellipsoidae Cucumis melo Cucumis sativus Cucurbita maxima Cucurbita moschata Cucurbita pepo Cyanidioschyzon merolae Daucus carota Dendrobium catenatum Durio zibethinus Elaeis guineensis Erythranthe guttata Eucalyptus grandis Eutrema salsugineum Fragaria vesca Galdieria sulphuraria Glycine max Gossypium hirsutum Gossypium raimondii Herrania umbratica Hevea brasiliensis Ipomoea nil Jatropha curcas Juglans regia Lactuca sativa Lupinus angustifolius Malus domestica Manihot esculenta Medicago truncatula Micromonas pusilla Momordica charantia Monoraphidium neglectum Morus notabilis Musa acuminata Nelumbo nucifera Nicotiana sylvestris Nicotiana tomentosiformis Olea europaea Oryza brachyantha Oryza sativa Japonica Ostreococcus lucimarinus Ostreococcus tauri Phalaenopsis equestris Phaseolus vulgaris Physcomitrella patens Populus euphratica Populus trichocarpa Prunus avium Prunus mume Prunus persica Pyrus x bretschneideri Quercus suber Raphanus sativus Ricinus communis Rosa chinensis Selaginella moellendorffii Sesamum indicum Setaria italica Solanum lycopersicum Solanum pennellii Solanum tuberosum Sorghum bicolor Spinacia oleracea Tarenaya hassleriana Theobroma cacao Vigna angularis Vigna radiata Vitis vinifera Volvox carteri Zea mays Ziziphus jujuba Repeat Type Di Tri Tetra Penta Hexa Compound